RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 SLC25A31Q9H0C2 315 aa2.4□□□□□ -2.03
SNHG1-222ENST00000545308 FBXL15Q9H469 300 aa2.4□□□□□ -2.03
SNHG1-222ENST00000545308 RHOFQ9HBH0 211 aa2.4□□□□□ -2.03
SNHG1-222ENST00000545308 POPDC3Q9HBV1 291 aa2.4□□□□□ -2.03
SNHG1-222ENST00000545308 PRO0461Q9UI25 63 aa2.4□□□□□ -2.03
SNHG1-222ENST00000545308 A0A1W2PQD3 144 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 C7orf66A4D0T2 115 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 COLCA2A8K830 154 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 C4orf51C9J302 202 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 C8orf87E5RJ46 101 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 M0R233 179 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 SYNGR1O43759 233 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 OR7C2O60412 319 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 LY6HO94772 140 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 ATP6V1G2O95670 118 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 CLPSP04118 112 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 IL4P05112 153 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 SNRPAP09012 282 aaKnown RBP2.39□□□□□ -2.03
SNHG1-222ENST00000545308 OR12D1P0DN82 309 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 RCVRNP35243 200 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 PSMD7P51665 324 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 ATP5G2Q06055 141 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 MOBPQ13875 183 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 TMEM176BQ3YBM2 270 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-222ENST00000545308 COX19Q49B96 90 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 TRMT12Q53H54 448 aaKnown RBP2.39□□□□□ -2.03
SNHG1-222ENST00000545308 SPANXN3Q5MJ09 141 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 KPRPQ5T749 579 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-222ENST00000545308 SLC48A1Q6P1K1 146 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 C1orf174Q8IYL3 243 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 MIR7-3HGQ8N6C7 128 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 GATD1Q8NB37 220 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 OR52R1Q8NGF1 315 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 OR2K2Q8NGT1 345 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 OR5H2Q8NGV7 314 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 PIGXQ8TBF5 258 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 STAG3L4Q8TBR4 150 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 ZNF675Q8TD23 568 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 RAB8BQ92930 207 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 DERL2Q9GZP9 239 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 AICDAQ9GZX7 198 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 UBQLN4Q9NRR5 601 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 TMEM38BQ9NVV0 291 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 COMMD9Q9P000 198 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 OPTCQ9UBM4 332 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 S4R3C0 116 aa2.39□□□□□ -2.03
SNHG1-222ENST00000545308 PRKDCP78527 4128 aaKnown RBP2.39□□□□□ -2.03
SNHG1-222ENST00000545308 TRAV8-3A0A0A6YYJ7 113 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 FAM183AA6NL82 134 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 CEACAM18A8MTB9 384 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 CLDN25C9JDP6 229 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 COX7A2P2O60397 106 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 ORM1P02763 201 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 GYPCP04921 128 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 IFI6P09912 130 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 SCGB1C2P0DMR2 95 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 SLC2A1P11166 492 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 SPNP16150 400 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 COL8A2P25067 703 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 GLRXP35754 106 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 RPL14P50914 215 aaKnown RBP2.38□□□□□ -2.03
SNHG1-222ENST00000545308 LINC00315P59091 139 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 BTN1A1Q13410 526 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 SLC9A3R2Q15599 337 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 NNATQ16517 81 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 TMEM241Q24JQ0 296 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 PLPPR5Q32ZL2 321 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 C3orf33Q6P1S2 294 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 PRSS54Q6PEW0 395 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 LRRN1Q6UXK5 716 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 TMPPEQ6ZT21 453 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 FA2HQ7L5A8 372 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 MARCH3Q86UD3 253 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 ZNF709Q8N972 641 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 ZIC4Q8N9L1 334 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 ST20-AS1Q8NBB2 130 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 LFNGQ8NES3 379 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 SCGB1C1Q8TD33 95 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 CASTOR1Q8WTX7 329 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 TWIST2Q8WVJ9 160 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 YPEL4Q96NS1 127 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 SPIN2AQ99865 258 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 SPIN2BQ9BPZ2 258 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 ZNF426Q9BUY5 554 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 C1QTNF6Q9BXI9 259 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 OR51E2Q9H255 320 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 HDGFL3Q9Y3E1 203 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 V9GYY5 206 aaPredicted RBP2.38□□□□□ -2.03
SNHG1-222ENST00000545308 DSPPQ9NZW4 1301 aa2.38□□□□□ -2.03
SNHG1-222ENST00000545308 A0A0A6YYH2 397 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 IGHV1-69-2A0A0G2JMI3 117 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 A6NJ64 397 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 C9JQL5 133 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 ATP6V1G2-DDX39BF2Z307 99 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 CBR1P16152 277 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 AKR1C4P17516 323 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 TGFBR2P37173 567 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 DLX6P56179 175 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 STX5Q13190 355 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 TSNQ15631 228 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 336 ms