RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TRBV6-6A0A0A6YYG2 114 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 IGHV3-35A0A0C4DH35 117 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 IGHV7-4-1A0A0J9YVY3 117 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 A0A1W2PPQ1 181 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 MFSD2BA6NFX1 497 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 SMIM9A6NGZ8 99 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 SNTNA6NMZ2 147 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 M0R129 80 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 DNASE2O00115 360 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-220ENST00000544550 CHEK1O14757 476 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 CRYZL1O95825 349 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 NAPSAO96009 420 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 REG1AP05451 166 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 EIF4EP06730 217 aaKnown RBP2.87□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF735P0CB33 412 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 SAA1P0DJI8 122 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-220ENST00000544550 PRKACGP22612 351 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 GNRHRP30968 328 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 FGF9P31371 208 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-220ENST00000544550 PSMD7P51665 324 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 BRWD1-AS2P59051 145 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 DEFB131AP59861 70 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 RELQ04864 619 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-220ENST00000544550 PLA2G7Q13093 441 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 ARFRP1Q13795 201 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 IGSF11Q5DX21 431 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 LEMD1Q68G75 181 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 WDR73Q6P4I2 378 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF880Q6PDB4 577 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 C9orf47Q6ZRZ4 202 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 SSX9Q7RTT3 188 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 TRPT1Q86TN4 253 aaKnown RBP2.87□□□□□ -1.95
SNHG1-220ENST00000544550 CCDC190Q86UF4 302 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 CDH26Q8IXH8 852 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 DEFB107AQ8IZN7 70 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 HS3ST5Q8IZT8 346 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF114Q8NC26 417 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 DUSP18Q8NEJ0 188 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 OR8J1Q8NGP2 316 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 VN1R17PQ8TDU5 208 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 DEFB104AQ8WTQ1 72 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 RNF2Q99496 336 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 GFI1Q99684 422 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 PDCD1LG2Q9BQ51 273 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 UQCC2Q9BRT2 126 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 NIPSNAP3BQ9BS92 247 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 DCUN1D5Q9BTE7 237 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 RHPN1-AS1Q9BWJ2 59 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 SCRT1Q9BWW7 348 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 OR2D2Q9H210 308 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 BANF2Q9H503 90 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 SDHAF2Q9NX18 166 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 RDH8Q9NYR8 311 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 OR1A1Q9P1Q5 309 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 MDFICQ9P1T7 246 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 PUS1Q9Y606 427 aaKnown RBP eCLIP2.87□□□□□ -1.95
SNHG1-220ENST00000544550 S4R3C0 116 aa2.87□□□□□ -1.95
SNHG1-220ENST00000544550 TRAV14DV4A0A0A6YYC5 116 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 ERICH4A6NGS2 130 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 OR2T8A6NH00 312 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 J3QRE1 110 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 DCTN3O75935 186 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 SMR3BP02814 79 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-220ENST00000544550 GIG44P09565 113 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-220ENST00000544550 UBBP0CG47 229 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 HTN3P15516 51 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 SRMP19623 302 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 C4BPBP20851 252 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 ALDH3B2P48448 385 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 DAPP51397 102 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 GBX2P52951 348 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-220ENST00000544550 ERVFC1-1P60608 527 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 CCDC58Q4VC31 144 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 C10orf55Q5SWW7 151 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 MEDAGQ5VYS4 303 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 THOC7Q6I9Y2 204 aaKnown RBP2.86□□□□□ -1.95
SNHG1-220ENST00000544550 GSG1LQ6UXU4 331 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 GBGT1Q8N5D6 347 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 JAGN1Q8N5M9 183 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 CSNK1G2-AS1Q8NCQ2 148 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 THAP6Q8TBB0 222 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 SCARB1Q8WTV0 552 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 GINS3Q9BRX5 216 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 MAGT1Q9H0U3 335 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 OR51E2Q9H255 320 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 MS4A6AQ9H2W1 248 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 KCNK15Q9H427 330 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 TMEM231Q9H6L2 316 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 MRPS7Q9Y2R9 242 aaKnown RBP2.86□□□□□ -1.95
SNHG1-220ENST00000544550 PRELID3BQ9Y3B1 194 aa2.86□□□□□ -1.95
SNHG1-220ENST00000544550 RBM7Q9Y580 266 aaKnown RBP2.86□□□□□ -1.95
SNHG1-220ENST00000544550 HMCN2Q8NDA2 5059 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 IGLV5-37A0A075B6J1 123 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 NUPL2O15504 423 aaKnown RBP2.85□□□□□ -1.95
SNHG1-220ENST00000544550 ST8SIA3O43173 380 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF207O43670 478 aaKnown RBP2.85□□□□□ -1.95
SNHG1-220ENST00000544550 KBTBD11O94819 623 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 DIRAS3O95661 229 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 OXTP01178 125 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 IGKV2-30P06310 120 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms