RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-215	ENST00000544504	ZNF48	Q96MX3	618 aa	Predicted RBP	7.54	□□□□□ -1.2
YBX3-215	ENST00000544504	AQP10	Q96PS8	301 aa		7.54	□□□□□ -1.2
YBX3-215	ENST00000544504	RNF126	Q9BV68	326 aa		7.54	□□□□□ -1.2
YBX3-215	ENST00000544504	PRSS22	Q9GZN4	317 aa		7.54	□□□□□ -1.2
YBX3-215	ENST00000544504	NPFFR1	Q9GZQ6	430 aa		7.54	□□□□□ -1.2
YBX3-215	ENST00000544504	ZC4H2	Q9NQZ6	224 aa		7.54	□□□□□ -1.2
YBX3-215	ENST00000544504	LYRM2	Q9NU23	88 aa	Predicted RBP	7.54	□□□□□ -1.2
YBX3-215	ENST00000544504	ZNF580	Q9UK33	172 aa		7.54	□□□□□ -1.2
YBX3-215	ENST00000544504	TNFSF18	Q9UNG2	199 aa		7.54	□□□□□ -1.2
YBX3-215	ENST00000544504	SOX21	Q9Y651	276 aa	Predicted RBP	7.54	□□□□□ -1.2
YBX3-215	ENST00000544504		G3V3Q6	166 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504		H0YIZ8	118 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	SMLR1	H3BR10	107 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	CORT	O00230	105 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	FCN1	O00602	326 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	ARPC5	O15511	151 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	IFNA10	P01566	189 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	IAPP	P10997	89 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	RPL12	P30050	165 aa	Known RBP	7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	VDAC2	P45880	294 aa	Predicted RBP	7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	EIF2B2	P49770	351 aa	Known RBP	7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	HBG1	P69891	147 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	HBG2	P69892	147 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	MRGPRG-AS1	Q2M3A8	158 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504		Q5BKY6	102 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	SPANXN5	Q5MJ07	72 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	SLC24A4	Q8NFF2	622 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	GRPEL2	Q8TAA5	225 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	MFF	Q9GZY8	342 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	C11orf1	Q9H5F2	150 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	OR5AC2	Q9NZP5	309 aa		7.53	□□□□□ -1.2
YBX3-215	ENST00000544504	IGHV7-81	A0A0B4J1V7	117 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	IGLC7	A0M8Q6	106 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	MSGN1	A6NI15	193 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	AP4M1	O00189	453 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	TAAR5	O14804	337 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	IGHG2	P01859	326 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	OPN1MW	P04001	364 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	OR8U8	P0C7N1	319 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	OPN1MW2	P0DN77	364 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	OPN1MW3	P0DN78	364 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	OR13C7	P0DN81	318 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	NPY1R	P25929	384 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	SULT1A1	P50225	295 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	CRIP2	P52943	208 aa	Predicted RBP	7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	AP2S1	P53680	142 aa	Predicted RBP	7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	CD300C	Q08708	224 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	FOXL1	Q12952	345 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	C2orf83	Q53S99	150 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	C9orf152	Q5JTZ5	239 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	SLC35E3	Q7Z769	313 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	ZNF114	Q8NC26	417 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	PINX1	Q96BK5	328 aa	Known RBP	7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	GON7	Q9BXV9	100 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	PARP11	Q9NR21	331 aa		7.52	□□□□□ -1.21
YBX3-215	ENST00000544504	TNC	P24821	2201 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	KANTR	A0A1W2PQU2	76 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	DNAJC9-AS1	A6NH13	148 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	NPIPB5	A8MRT5	1133 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	TEX22	C9J3V5	150 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	BOLA2-SMG1P6	H3BVE0	249 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	AMY1A	P04745	511 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	IFNA4	P05014	189 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	IGF1	P05019	195 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	CRYBA1	P05813	215 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	HKR1	P10072	659 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	MYOD1	P15172	320 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	HIST1H1B	P16401	226 aa	Known RBP	7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	S100A11	P31949	105 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	PAX9	P55771	341 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	EIF5A	P63241	154 aa	Known RBP	7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	ATP6V1F	Q16864	119 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	BSX	Q3C1V8	233 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	AKIRIN2	Q53H80	203 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	FBLN7	Q53RD9	439 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	SPINK9	Q5DT21	86 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	ARSJ	Q5FYB0	599 aa	Predicted RBP	7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	C10orf55	Q5SWW7	151 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	TMEM14EP	Q6UXP3	125 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	STPG2	Q8N412	459 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	KCNRG	Q8N5I3	272 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	TMEM252	Q8N6L7	170 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	OR11H4	Q8NGC9	324 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	OR10P1	Q8NGE3	313 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	OR1P1	Q8NH06	330 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	RNASEH2C	Q8TDP1	164 aa	Known RBP	7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	RBMXL1	Q96E39	390 aa	Known RBP	7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	GGACT	Q9BVM4	153 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	THYN1	Q9P016	225 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	PAIP2B	Q9ULR5	123 aa	Known RBP	7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	HSPB11	Q9Y547	144 aa		7.51	□□□□□ -1.21
YBX3-215	ENST00000544504	TRAV41	A0A0B4J266	112 aa		7.5	□□□□□ -1.21
YBX3-215	ENST00000544504	RPS10-NUDT3	A0A1W2PQS6	291 aa		7.5	□□□□□ -1.21
YBX3-215	ENST00000544504	FAM24A	A6NFZ4	105 aa		7.5	□□□□□ -1.21
YBX3-215	ENST00000544504	CGB1	A6NKQ9	187 aa		7.5	□□□□□ -1.21
YBX3-215	ENST00000544504		E7EUB6	86 aa		7.5	□□□□□ -1.21
YBX3-215	ENST00000544504		H3BP45	60 aa		7.5	□□□□□ -1.21
YBX3-215	ENST00000544504	ATP6V0E1	O15342	81 aa		7.5	□□□□□ -1.21
YBX3-215	ENST00000544504	DFFB	O76075	338 aa		7.5	□□□□□ -1.21
YBX3-215	ENST00000544504	TMEM50A	O95807	157 aa		7.5	□□□□□ -1.21

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