RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PI4KAP42356 2102 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 CACNA1HO95180 2353 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 SIAH2O43255 324 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 RAMP3O60896 148 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 PF4P02776 101 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 SAA1P0DJI8 122 aaPredicted RBP10.73□□□□□ -0.69
CHD4-211ENST00000544484 MEF2CQ06413 473 aaPredicted RBP10.73□□□□□ -0.69
CHD4-211ENST00000544484 SMUG1Q53HV7 270 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 ZNF385CQ66K41 422 aaPredicted RBP10.73□□□□□ -0.69
CHD4-211ENST00000544484 RBFOX2O43251 390 aaKnown RBP eCLIP10.72□□□□□ -0.691e-6■■■■□ 21
CHD4-211ENST00000544484 ATP5G3P48201 142 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 HERPUD1Q15011 391 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.72□□□□□ -0.69
CHD4-211ENST00000544484 HIST1H2BAQ96A08 127 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 TRPM7Q96QT4 1865 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 A0A0A6YYD4 124 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 SCO2A0A1W2PP80 73 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 HINT1P49773 126 aaPredicted RBP10.72□□□□□ -0.69
CHD4-211ENST00000544484 SNRPD3P62318 126 aaKnown RBP10.72□□□□□ -0.69
CHD4-211ENST00000544484 ARPC1AQ92747 370 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 GFI1Q99684 422 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 J3QRE1 110 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 RPLP1P05386 114 aaKnown RBP10.72□□□□□ -0.69
CHD4-211ENST00000544484 DLX6P56179 175 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 ZNF506Q5JVG8 444 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 FAM159AQ6UWV7 190 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 GGNQ86UU5 652 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 WNT10AQ9GZT5 417 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 CD55P08174 381 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 RPS20P60866 119 aaKnown RBP10.72□□□□□ -0.69
CHD4-211ENST00000544484 MIR17HGQ75NE6 70 aa10.72□□□□□ -0.69
CHD4-211ENST00000544484 RAB9AP51151 201 aa10.71□□□□□ -0.69
CHD4-211ENST00000544484 TEX45Q8NA69 505 aa10.71□□□□□ -0.69
CHD4-211ENST00000544484 TMEM250H0YL14 139 aa10.71□□□□□ -0.7
CHD4-211ENST00000544484 ATP5IP56385 69 aaPredicted RBP10.71□□□□□ -0.7
CHD4-211ENST00000544484 SRSF6Q13247 344 aaKnown RBP10.71□□□□□ -0.7
CHD4-211ENST00000544484 IGKV1-12A0A0C4DH73 117 aa10.71□□□□□ -0.7
CHD4-211ENST00000544484 M0QZK8 103 aa10.71□□□□□ -0.7
CHD4-211ENST00000544484 M0R381 172 aa10.71□□□□□ -0.7
CHD4-211ENST00000544484 GGCTO75223 188 aaKnown RBP10.71□□□□□ -0.7
CHD4-211ENST00000544484 IGKV1D-12P01611 117 aa10.71□□□□□ -0.7
CHD4-211ENST00000544484 CCL1P22362 96 aa10.71□□□□□ -0.7
CHD4-211ENST00000544484 MORN2Q502X0 79 aa10.71□□□□□ -0.7
CHD4-211ENST00000544484 CA7P43166 264 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 Q0VFX4 171 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 OR52E5Q8NH55 327 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 MPDZO75970 2070 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 TRBV20OR9-2A0A075B6H5 130 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 A0A1W2PRX2 142 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 SELLP14151 372 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 ZNF497Q6ZNH5 498 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 C17orf82Q86X59 251 aaPredicted RBP10.7□□□□□ -0.7
CHD4-211ENST00000544484 ZNF525Q8N782 197 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 CXorf65A6NEN9 183 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 PRSS2P07478 247 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 EFNB1P98172 346 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 TCF24Q7RTU0 167 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 TSPOP30536 169 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 BIVMQ86UB2 503 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 FAM90A1Q86YD7 464 aa10.7□□□□□ -0.7
CHD4-211ENST00000544484 HEATR1Q9H583 2144 aaKnown RBP10.69□□□□□ -0.7
CHD4-211ENST00000544484 C7orf71A4D174 169 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 GAS1P54826 345 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 PRSS8Q16651 343 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 RNF126Q9BV68 326 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 CRYGSP22914 178 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 ABCA4P78363 2273 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 GPX4P36969 197 aaPredicted RBP10.69□□□□□ -0.7
CHD4-211ENST00000544484 IMMP2LQ96T52 175 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 ATG101Q9BSB4 218 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 DOCK7Q96N67 2140 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 PRB4P10163 310 aaPredicted RBP10.69□□□□□ -0.7
CHD4-211ENST00000544484 SAPCD1Q5SSQ6 148 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 LEMD1Q68G75 181 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 SMIM12Q96EX1 92 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 F11RQ9Y624 299 aaKnown RBP10.69□□□□□ -0.7
CHD4-211ENST00000544484 KIAA2026Q5HYC2 2103 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 YPEL1O60688 119 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 SOD3P08294 240 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 CD69Q07108 199 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 RAB37Q96AX2 223 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 YPEL2Q96QA6 119 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 GGACTQ9BVM4 153 aa10.69□□□□□ -0.7
CHD4-211ENST00000544484 LOC107984156A0A0G2JMH3 177 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 C5orf63A6NC05 138 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 IGHV1-46P01743 117 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 LINC00271P0C7V0 271 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 RTN4RL2Q86UN3 420 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 ARL17AQ8IVW1 177 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 OR4D5Q8NGN0 318 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 WNK2Q9Y3S1 2297 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 PEX7O00628 323 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 SRP19P09132 144 aaKnown RBP10.68□□□□□ -0.7
CHD4-211ENST00000544484 OR10AG1Q8NH19 301 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 NABP1Q96AH0 204 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 CBLN4Q9NTU7 201 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 FAM89BQ8N5H3 189 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 ITLN2Q8WWU7 325 aaPredicted RBP10.68□□□□□ -0.7
CHD4-211ENST00000544484 C18orf12Q96KH6 178 aa10.68□□□□□ -0.7
CHD4-211ENST00000544484 TMEM133Q9H2Q1 129 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms