RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 GBF1Q92538 1859 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 EVPLQ92817 2033 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 KBTBD11-OT1A0A1B0GTJ5 212 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-211ENST00000543710 C15orf61A6NNL5 157 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 PLA2G2AP14555 144 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 KLK2P20151 261 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 PRSS53Q2L4Q9 553 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 CR1LQ2VPA4 569 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 DRAM1Q8N682 238 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 OR9G4Q8NGQ1 327 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 UCN2Q96RP3 112 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 ST20Q9HBF5 79 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 MYO7AQ13402 2215 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 GLI4P10075 376 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 LYPD1Q8N2G4 141 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 BEND2Q8NDZ0 799 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 OR4D5Q8NGN0 318 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 PLPPR1Q8TBJ4 325 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 KLF14Q8TD94 323 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-211ENST00000543710 ISOC2Q96AB3 205 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 C5orf30Q96GV9 206 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 ZNF414Q96IQ9 312 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 OVOL1O14753 267 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 LYPD3O95274 346 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 EMP1P54849 157 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 SNAI3Q3KNW1 292 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 ZNF525Q8N782 197 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 VGLL1Q99990 258 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 REG4Q9BYZ8 158 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 CD40P25942 277 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 CENPWQ5EE01 88 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 ABHD12Q8N2K0 398 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 PGLYRP4Q96LB8 373 aa6.58□□□□□ -1.36
VPS13D-211ENST00000543710 SPAG17Q6Q759 2223 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 DPRXA6NFQ7 191 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 H3BVH4 76 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 HRKO00198 91 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 LAIR2Q6ISS4 152 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 SHISA2Q6UWI4 295 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 HAPLN4Q86UW8 402 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 RFESDQ8TAC1 157 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 ARPC1AQ92747 370 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 IGHV3OR15-7A0A075B7D8 119 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 CCL2P13500 99 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 WNT5AP41221 380 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 TTC9CQ8N5M4 171 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 PAM16Q9Y3D7 125 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 SRIP30626 198 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 MIC13Q5XKP0 118 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 FOXL2NBQ6ZUU3 175 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 JKAMPQ9P055 326 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 CHCHD2Q9Y6H1 151 aaPredicted RBP6.57□□□□□ -1.36
VPS13D-211ENST00000543710 COL4A5P29400 1685 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 TRAV39A0A0B4J263 110 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 MYOD1P15172 320 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 IGF2-ASQ6U949 168 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 TMEM144Q7Z5S9 345 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 ITLN1Q8WWA0 313 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 HDHD3Q9BSH5 251 aaPredicted RBP6.57□□□□□ -1.36
VPS13D-211ENST00000543710 SLC25A39Q9BZJ4 359 aaPredicted RBP6.57□□□□□ -1.36
VPS13D-211ENST00000543710 NRN1Q9NPD7 142 aa6.57□□□□□ -1.36
VPS13D-211ENST00000543710 EFEMP2O95967 443 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 MOSP00540 346 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 ASCL4Q6XD76 172 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 LINC00305Q7Z4B0 112 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 OTOFQ9HC10 1997 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 IGKV3D-15A0A087WSY6 115 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 C1QL1O75973 258 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 GPX1P07203 203 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 BSPH1Q075Z2 132 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 S100A7L2Q5SY68 101 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 ZNF880Q6PDB4 577 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 PRORYQ9H606 182 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 MRPL27Q9P0M9 148 aaKnown RBP6.56□□□□□ -1.36
VPS13D-211ENST00000543710 A0A1B0GUT8 65 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 PSPNO60542 156 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 SRSF1Q07955 248 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS13D-211ENST00000543710 UNQ5815/PRO19632Q6UWF5 114 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 ICAM4Q14773 271 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 ARL6IP6Q8N6S5 226 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 NUDT11Q96G61 164 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 TRAV14DV4A0A0A6YYC5 116 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 A0A1W2PP11 408 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 ZNF324O75467 553 aaPredicted RBP6.56□□□□□ -1.36
VPS13D-211ENST00000543710 HSD52Q0P140 79 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 ZNF841Q6ZN19 808 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 ORMDL3Q8N138 153 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 PRR13Q9NZ81 148 aa6.56□□□□□ -1.36
VPS13D-211ENST00000543710 TRBV24-1A0A075B6N3 115 aa6.55□□□□□ -1.36
VPS13D-211ENST00000543710 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.55□□□□□ -1.36
VPS13D-211ENST00000543710 OR11H12B2RN74 326 aa6.55□□□□□ -1.36
VPS13D-211ENST00000543710 RND2P52198 227 aa6.55□□□□□ -1.36
VPS13D-211ENST00000543710 UNC119Q13432 240 aa6.55□□□□□ -1.36
VPS13D-211ENST00000543710 OR11H1Q8NG94 326 aa6.55□□□□□ -1.36
VPS13D-211ENST00000543710 OR5AN1Q8NGI8 311 aa6.55□□□□□ -1.36
VPS13D-211ENST00000543710 OR11H2Q8NH07 326 aa6.55□□□□□ -1.36
VPS13D-211ENST00000543710 CCL13Q99616 98 aa6.55□□□□□ -1.36
VPS13D-211ENST00000543710 PKIGQ9Y2B9 76 aa6.55□□□□□ -1.36
VPS13D-211ENST00000543710 NYNRINQ9P2P1 1898 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms