RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 A0A1B0GW64 132 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 E5RGE8 158 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 INS-IGF2F8WCM5 200 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 CORTO00230 105 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 FBXO24O75426 580 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 MPC2O95563 127 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 OR8U8P0C7N1 319 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 EGR2P11161 476 aaPredicted RBP9.35□□□□□ -0.91
DDB1-223ENST00000543658 HIST1H1BP16401 226 aaKnown RBP9.35□□□□□ -0.91
DDB1-223ENST00000543658 NUP62P37198 522 aaPredicted RBP9.35□□□□□ -0.91
DDB1-223ENST00000543658 CAV2P51636 162 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 TAS2R30P59541 319 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 WT1-ASQ06250 92 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 FOXL1Q12952 345 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 SPANXN5Q5MJ07 72 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 TMEM65Q6PI78 240 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 TTC9CQ8N5M4 171 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 OR4X2Q8NGF9 303 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 DCUN1D4Q92564 292 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 TEP1Q99973 2627 aaKnown RBP9.35□□□□□ -0.91
DDB1-223ENST00000543658 RANGRFQ9HD47 186 aaPredicted RBP9.35□□□□□ -0.91
DDB1-223ENST00000543658 ZC4H2Q9NQZ6 224 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 THYN1Q9P016 225 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 STRAPQ9Y3F4 350 aaKnown RBP9.35□□□□□ -0.91
DDB1-223ENST00000543658 RNF114Q9Y508 228 aa9.35□□□□□ -0.91
DDB1-223ENST00000543658 CLPSL1A2RUU4 121 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 H3BP45 60 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 H3BUA1 57 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 PFDN1O60925 122 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 TSC22D2O75157 780 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 SCAF4O95104 1147 aaKnown RBP9.34□□□□□ -0.91
DDB1-223ENST00000543658 IFNA4P05014 189 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 PF4V1P10720 104 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 CTRB1P17538 263 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 ATP5IP56385 69 aaPredicted RBP9.34□□□□□ -0.91
DDB1-223ENST00000543658 IL15RAQ13261 267 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 ASPHD1Q5U4P2 390 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 CTRB2Q6GPI1 263 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 C11orf87Q6NUJ2 197 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 SLC25A24Q6NUK1 477 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 PRSS54Q6PEW0 395 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 TEX38Q6PEX7 206 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 COMMD1Q8N668 190 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 KLHDC1Q8N7A1 406 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.34□□□□□ -0.91
DDB1-223ENST00000543658 ZNF114Q8NC26 417 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 OR1P1Q8NH06 330 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 LINC01006Q8NI28 216 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 TAF15Q92804 592 aaKnown RBP eCLIP9.34□□□□□ -0.91
DDB1-223ENST00000543658 MISP3Q96FF7 219 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 SMIM8Q96KF7 97 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 WNT10AQ9GZT5 417 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 SERTAD4Q9NUC0 356 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 MBD2Q9UBB5 411 aa9.34□□□□□ -0.91
DDB1-223ENST00000543658 F11RQ9Y624 299 aaKnown RBP9.34□□□□□ -0.91
DDB1-223ENST00000543658 FXYD6-FXYD2A0A087WZ82 144 aa9.33□□□□□ -0.92
DDB1-223ENST00000543658 CRYGCP07315 174 aa9.33□□□□□ -0.92
DDB1-223ENST00000543658 MDKP21741 143 aaPredicted RBP9.33□□□□□ -0.92
DDB1-223ENST00000543658 TPPP2P59282 170 aa9.33□□□□□ -0.92
DDB1-223ENST00000543658 C2orf83Q53S99 150 aa9.33□□□□□ -0.92
DDB1-223ENST00000543658 ZNF329Q86UD4 541 aa9.33□□□□□ -0.92
DDB1-223ENST00000543658 STX12Q86Y82 276 aa9.33□□□□□ -0.92
DDB1-223ENST00000543658 WDR89Q96FK6 387 aaPredicted RBP9.33□□□□□ -0.92
DDB1-223ENST00000543658 P2RX4Q99571 388 aa9.33□□□□□ -0.92
DDB1-223ENST00000543658 SLC25A31Q9H0C2 315 aa9.33□□□□□ -0.92
DDB1-223ENST00000543658 SLA2Q9H6Q3 261 aa9.33□□□□□ -0.92
DDB1-223ENST00000543658 RPS10-NUDT3A0A1W2PQS6 291 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 TMEM89A2RUT3 159 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 TRGV3P03979 118 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 ELANEP08246 267 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 RNASE2P10153 161 aaKnown RBP9.32□□□□□ -0.92
DDB1-223ENST00000543658 PPIFP30405 207 aaKnown RBP9.32□□□□□ -0.92
DDB1-223ENST00000543658 OPRK1P41145 380 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 P2RY1P47900 373 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 EXOSC2Q13868 293 aaKnown RBP9.32□□□□□ -0.92
DDB1-223ENST00000543658 KHDC1LQ5JSQ8 128 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 ETFRF1Q6IPR1 90 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 PRIMA1Q86XR5 153 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 OR5AU1Q8NGC0 362 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 TMEM158Q8WZ71 300 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 PINX1Q96BK5 328 aaKnown RBP9.32□□□□□ -0.92
DDB1-223ENST00000543658 MS4A10Q96PG2 267 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 LYRM2Q9NU23 88 aaPredicted RBP9.32□□□□□ -0.92
DDB1-223ENST00000543658 OR5AC2Q9NZP5 309 aa9.32□□□□□ -0.92
DDB1-223ENST00000543658 CUBNO60494 3623 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 TRAV14DV4A0A0A6YYC5 116 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 A0A0G2JLM5 398 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 FAM223BA6NKX1 122 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 OR2J3O76001 311 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 IGHG4P01861 327 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 PRH1P02810 166 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 METTL15P1P0C7V9 234 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 HBG1P69891 147 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 HBG2P69892 147 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 FOXE3Q13461 319 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 C19orf54Q5BKX5 351 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 OR8G2PQ6IF36 304 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 ETV3LQ6ZN32 361 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 C19orf35Q6ZS72 473 aa9.31□□□□□ -0.92
DDB1-223ENST00000543658 FAM223AQ8IWN6 122 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms