RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	MDFI	Q99750	246 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	KLK15	Q9H2R5	256 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	HSPB7	Q9UBY9	170 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	LSM5	Q9Y4Y9	91 aa	Known RBP	7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545		H3BUA1	57 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545		L7N2F9	121 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	SYNGR2	O43760	224 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	SSSCA1	O60232	199 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	SOX15	O60248	233 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	OR2J3	O76001	311 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	IFNA10	P01566	189 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	CRYGC	P07315	174 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	CTRB1	P17538	263 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	RRAS2	P62070	204 aa	Predicted RBP	7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	VAMP2	P63027	116 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	ID3	Q02535	119 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	SRSF4	Q08170	494 aa	Known RBP	7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	C19orf54	Q5BKX5	351 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	HIST2H2BD	Q6DRA6	164 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	CTRB2	Q6GPI1	263 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	OR4D5	Q8NGN0	318 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	OR1L6	Q8NGR2	347 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	WFDC12	Q8WWY7	111 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	MISP3	Q96FF7	219 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	CIB3	Q96Q77	187 aa	Predicted RBP	7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	SLA2	Q9H6Q3	261 aa		7.94	□□□□□ -1.14
CPSF7-221	ENST00000543545	hCG_2014768	A0A024R1R8	64 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545		A0A1W2PRX2	142 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	NUDT19	A8MXV4	375 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	IGLV1-40	P01703	118 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	MBP	P02686	304 aa	Predicted RBP	7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	RLN2	P04090	185 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	RPLP1	P05386	114 aa	Known RBP	7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	HIST1H1B	P16401	226 aa	Known RBP	7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	PVALB	P20472	110 aa	Predicted RBP	7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	PSMB8	P28062	276 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	HTR2B	P41595	481 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	KRTAP10-3	P60369	221 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	RPP30	P78346	268 aa	Known RBP	7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	RHOG	P84095	191 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	DEFA5	Q01523	94 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	ATP5G2	Q06055	141 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	LRRC37A5P	Q49AS3	106 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	PDLIM3	Q53GG5	364 aa	Predicted RBP	7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	C11orf87	Q6NUJ2	197 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545		Q6ZNX1	250 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	NOXA1	Q86UR1	476 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	SLC24A4	Q8NFF2	622 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	OR1P1	Q8NH06	330 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	P2RX4	Q99571	388 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	CITED2	Q99967	270 aa	Predicted RBP	7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	ZNF747	Q9BV97	191 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	ZFP57	Q9NU63	452 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	THYN1	Q9P016	225 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	FBXL7	Q9UJT9	491 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	F11R	Q9Y624	299 aa	Known RBP	7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545		U3KQ87	197 aa		7.93	□□□□□ -1.14
CPSF7-221	ENST00000543545	IGHV3-21	A0A0B4J1V1	117 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545		A0A0G2JLM5	398 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	INS-IGF2	F8WCM5	200 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	PLXNB1	O43157	2135 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	NDUFB8	O95169	186 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	LY86	O95711	162 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	IGHV3-11	P01762	117 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	IFNA4	P05014	189 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	CXCL3	P19876	107 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	NPY1R	P25929	384 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	BCAP31	P51572	246 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	H2BFS	P57053	126 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	RPL23A	P62750	156 aa	Known RBP	7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	CD83	Q01151	205 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	RAB32	Q13637	225 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	NSUN5P1	Q3KNT7	163 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	TCTEX1D4	Q5JR98	221 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	SPANXN5	Q5MJ07	72 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	NECAP1	Q8NC96	275 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	OR11H7	Q8NGC8	314 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	WIPF2	Q8TF74	440 aa	Predicted RBP	7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	PINX1	Q96BK5	328 aa	Known RBP	7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	USMG5	Q96IX5	58 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	OR5B12	Q96R08	314 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	RAB40C	Q96S21	281 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	NMES1	Q9C002	83 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	PSENEN	Q9NZ42	101 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	RCL1	Q9Y2P8	373 aa	Known RBP	7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	TSSC4	Q9Y5U2	329 aa	Predicted RBP	7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	TNC	P24821	2201 aa		7.92	□□□□□ -1.14
CPSF7-221	ENST00000543545	IGLV11-55	A0A075B6I3	123 aa		7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	FAM223B	A6NKX1	122 aa		7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545		H3BP45	60 aa		7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545		K7EPK0	472 aa		7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	OR8U8	P0C7N1	319 aa		7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	RNASE2	P10153	161 aa	Known RBP	7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	RAB11A	P62491	216 aa		7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	SHISA2	Q6UWI4	295 aa		7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	FAM223A	Q8IWN6	122 aa		7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	ZNF491	Q8N8L2	437 aa		7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	PPP1R1C	Q8WVI7	109 aa		7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	WDR89	Q96FK6	387 aa	Predicted RBP	7.91	□□□□□ -1.14
CPSF7-221	ENST00000543545	FANCD2OS	Q96PS1	177 aa		7.91	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms