RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SAP30O75446 220 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 SRSF10O75494 262 aaKnown RBP5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 KRTDAPP60985 99 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 OR4A47Q6IF82 309 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 PQLC2Q6ZP29 291 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 ZNF818PQ6ZRF7 136 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 C1QL2Q7Z5L3 287 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 LDLRAD3Q86YD5 345 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 MBD3L2Q8NHZ7 208 aaPredicted RBP5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 SOX21Q9Y651 276 aaPredicted RBP5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 ZNF407Q9C0G0 2248 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 PROB1E7EW31 1015 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 SEC11BP0C7V7 166 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 HKR1P10072 659 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 HLA-DRB5Q30154 266 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 F5H768 121 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 IGHV1-46P01743 117 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 IL4P05112 153 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 TIRAPP58753 221 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 COLCA1Q6ZS62 124 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 ARPC1AQ92747 370 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 MED13LQ71F56 2210 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 B4DSR2 109 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 IGHG3P01860 377 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 CSN3P07498 182 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 OR5AL1P0C617 328 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 HNRNPA3P51991 378 aaKnown RBP5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 RUNX1Q01196 453 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 FAM166AQ6J272 317 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 WDR82Q6UXN9 313 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 SYT8Q8NBV8 401 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 MRPL30Q8TCC3 161 aaKnown RBP5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 FBLIM1Q8WUP2 373 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 NPIPB3Q92617 1050 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 SEC11CQ9BY50 192 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 ZMAT4Q9H898 229 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 FBXL7Q9UJT9 491 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 TNFSF18Q9UNG2 199 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 PKIGQ9Y2B9 76 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 IGHV3OR16-13A0A075B7E8 117 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 IGHV3-74A0A0B4J1X5 117 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 MELTFP08582 738 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 VDAC2P45880 294 aaPredicted RBP5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 CRYBA4P53673 196 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 PUSL1Q8N0Z8 303 aaKnown RBP5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 MST1P26927 711 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 FOXG1P55316 489 aaPredicted RBP5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 Q1RN00 199 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 COL5A1-AS1Q5SY13 56 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 PEAR1Q5VY43 1037 aaPredicted RBP5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 OR51G1Q8NGK1 321 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 C8orf46Q8TAG6 207 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 RCC1LQ96I51 464 aaKnown RBP5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 FAM210BQ96KR6 192 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 SLC25A33Q9BSK2 321 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 TMEM133Q9H2Q1 129 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 DNAJC4Q9NNZ3 241 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 COL4A6Q14031 1691 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 NYNRINQ9P2P1 1898 aaKnown RBP5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 ANK1P16157 1881 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 PQLC2LA1A4F0 135 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 OR4C46A6NHA9 309 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 IGHV3-48P01763 117 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 MIC13Q5XKP0 118 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 C20orf173Q96LM9 149 aa5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 ELF5Q9UKW6 265 aaPredicted RBP5.79□□□□□ -1.48
SRGAP1-206ENST00000543397 A0A0G2JK05 382 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 A0A1B0GTI1 187 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 IGKV3-15P01624 115 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 DDTP30046 118 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 DUTP33316 252 aaKnown RBP5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 DLX6P56179 175 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 PSG9Q00887 426 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 PMVKQ15126 192 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 LGALSLQ3ZCW2 172 aaPredicted RBP5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 SP5Q6BEB4 398 aaPredicted RBP5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 NEURL2Q9BR09 285 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 RSG1Q9BU20 258 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 MRPL20Q9BYC9 149 aaKnown RBP5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 PGPA6NDG6 321 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 M0QXV9 152 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 EFNA2O43921 213 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 CEACAM4O75871 244 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 PRSS1P07477 247 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 RPL29P47914 159 aaKnown RBP5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 TM2D1Q9BX74 207 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 C21orf62Q9NYP8 219 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 SLC25A15Q9Y619 301 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 MBNL3Q9NUK0 354 aaKnown RBP5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 IL36RNQ9UBH0 155 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 PRSS46E5RG02 174 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 NBR2O15453 112 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 GPX1P07203 203 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 PRR30Q53SZ7 412 aaPredicted RBP5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 DPPA3Q6W0C5 159 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 RNF152Q8N8N0 203 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 OR11H7Q8NGC8 314 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 TAF15Q92804 592 aaKnown RBP eCLIP5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 SLC25A28Q96A46 364 aa5.78□□□□□ -1.48
SRGAP1-206ENST00000543397 TMEM204Q9BSN7 226 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms