RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 DYNLRB2Q8TF09 96 aa9.84□□□□□ -0.83
TNFRSF1A-215ENST00000543359 SCARB1Q8WTV0 552 aa9.84□□□□□ -0.83
TNFRSF1A-215ENST00000543359 ZNF486Q96H40 463 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-215ENST00000543359 ATP6V0BQ99437 205 aa9.84□□□□□ -0.83
TNFRSF1A-215ENST00000543359 TSC22D3Q99576 134 aa9.84□□□□□ -0.83
TNFRSF1A-215ENST00000543359 CHRDL1Q9BU40 450 aa9.84□□□□□ -0.83
TNFRSF1A-215ENST00000543359 PLEKHA3Q9HB20 300 aa9.84□□□□□ -0.83
TNFRSF1A-215ENST00000543359 FKBP11Q9NYL4 201 aa9.84□□□□□ -0.83
TNFRSF1A-215ENST00000543359 IGHV3-21A0A0B4J1V1 117 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 IGHV3-35A0A0C4DH35 117 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 OR2T8A6NH00 312 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 IGKV1-5P01602 117 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 ELLP55199 621 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 PIGPP57054 158 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 RNASE10Q5GAN6 216 aaKnown RBP9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 CASC10Q5T4H9 136 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 ZNF57Q68EA5 555 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 PLET1Q6UQ28 207 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 OR2C3Q8N628 320 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 DEFB125Q8N687 156 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 OR1P1Q8NH06 330 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 TERB2Q8NHR7 220 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 DYNC2LI1Q8TCX1 351 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 C15orf40Q8WUR7 153 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 TMEM190Q8WZ59 177 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 TP53RKQ96S44 253 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 WFDC10AQ9H1F0 79 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 TUBA4BQ9H853 241 aa9.83□□□□□ -0.84
TNFRSF1A-215ENST00000543359 A0A0B4J293 547 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 GABARAPH6UMI1 98 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 I3L2K1 104 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 IFNA6P05013 189 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 CTSGP08311 255 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 S100GP29377 79 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 HSPE1P61604 102 aaKnown RBP9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 PRCDQ00LT1 54 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 SSBP1Q04837 148 aaKnown RBP9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 GUCA2BQ16661 112 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 IZUMO4Q1ZYL8 232 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 H2BFWTQ7Z2G1 175 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 CLVS1Q8IUQ0 354 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 MARC2Q969Z3 335 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 BSCL2Q96G97 398 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 TMEM56Q96MV1 263 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 SPATA25Q9BR10 227 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 HIPK2Q9H2X6 1198 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 SLC2A8Q9NY64 477 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 C21orf62Q9NYP8 219 aa9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 MRPL27Q9P0M9 148 aaKnown RBP9.82□□□□□ -0.84
TNFRSF1A-215ENST00000543359 OR11H12B2RN74 326 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 CYB5BO43169 146 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 FCGR2BP31994 310 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 TMBIM6P55061 237 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 TAS2R19P59542 299 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 PVRIGQ6DKI7 326 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 STEAP1BQ6NZ63 245 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 SPSB3Q6PJ21 355 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 BTNL8Q6UX41 500 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 OR1L6Q8NGR2 347 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 OR13C8Q8NGS7 320 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 OR4A16Q8NH70 328 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 RAB2BQ8WUD1 216 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 BCL7BQ9BQE9 202 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 PALMDQ9NP74 551 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 UFC1Q9Y3C8 167 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 CEPT1Q9Y6K0 416 aa9.81□□□□□ -0.84
TNFRSF1A-215ENST00000543359 TRAV25A0A0B4J276 109 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 C3orf85A0A1B0GTC6 90 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 INS-IGF2F8WCM5 200 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 NDUFA4O00483 81 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 CTDSPLO15194 276 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 RAB3DO95716 219 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 PGAM2P15259 253 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 PPP5CP53041 499 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 SMIM4Q8WVI0 70 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 SOSTQ9BQB4 213 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 RTBDNQ9BSG5 229 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 SLIRPQ9GZT3 109 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 C5orf66Q9H5L9 145 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 CCDC59Q9P031 241 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 ALMS1Q8TCU4 4167 aa9.8□□□□□ -0.84
TNFRSF1A-215ENST00000543359 A0A0G2JRQ6 117 aa9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 K7EMT4 169 aa9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 RGS5O15539 181 aa9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 SCAF4O95104 1147 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 CTSDP07339 412 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 UCP1P25874 307 aa9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 MRPS10P82664 201 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 SP6Q3SY56 376 aa9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 FAAP20Q6NZ36 180 aa9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 Q6ZRM9 215 aa9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 ZFAND1Q8TCF1 268 aa9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 MARCH1Q8TCQ1 289 aa9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 SRD5A3Q9H8P0 318 aa9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 RETNQ9HD89 108 aa9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 DAZ1Q9NQZ3 744 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-215ENST00000543359 IGHV3OR16-8A0A075B7F1 116 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 H3BMQ9 156 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 ST8SIA3O43173 380 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms