RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 CFAP47Q6ZTR5 3102 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 SERTM2A0A1B0GWG4 89 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 LINC00862A6NCI5 91 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 FABP1P07148 127 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 ZP3P21754 424 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 FABP9Q0Z7S8 132 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 LOC400499M0QZD8 3231 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 IGHV1-8P0DP01 117 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 USF1P22415 310 aaPredicted RBP8.34□□□□□ -1.07
TOP3A-208ENST00000542570 DLK1P80370 383 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 ID3Q02535 119 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 ZNF585BQ52M93 769 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 ATRAIDQ6UW56 229 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 RABAC1Q9UI14 185 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 TUBD1Q9UJT1 453 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 SLC45A2Q9UMX9 530 aa8.34□□□□□ -1.07
TOP3A-208ENST00000542570 DSCAMO60469 2012 aa8.34□□□□□ -1.08
TOP3A-208ENST00000542570 ZNF705FA8MVS1 300 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 ZNF705DP0CH99 300 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 ZNF705BP0CI00 300 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 OR5I1Q13606 314 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 USF2Q15853 346 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 HEPN1Q6WQI6 88 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 Q71RC1 249 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 HSD17B13Q7Z5P4 300 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 RCC1LQ96I51 464 aaKnown RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 TRAF4Q9BUZ4 470 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 TANC2Q9HCD6 1990 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 ATG2AQ2TAZ0 1938 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 IGHV2-26A0A0B4J1V2 119 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 FOXH1O75593 365 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 GOSR1O95249 250 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 ARL14EPLP0DKL9 152 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 CT45A10P0DMU9 189 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 NTF3P20783 257 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 CNTFRP26992 372 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 ERVK11-1P61568 191 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 ADORA2A-AS1P86434 159 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 BAGE3Q86Y29 109 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 BAGE2Q86Y30 109 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 CLRN3Q8NCR9 226 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 DBX1A6NMT0 343 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 TMEM50AO95807 157 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 CNN1P51911 297 aaKnown RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 ZNF137PP52743 207 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 MEF2CQ06413 473 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 SP5Q6BEB4 398 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 SMIM8Q96KF7 97 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 FOXA2Q9Y261 457 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-208ENST00000542570 AUP1Q9Y679 476 aa8.33□□□□□ -1.08
TOP3A-208ENST00000542570 CTXND1A0A1B0GTU2 59 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 ETFRF1Q6IPR1 90 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 STPG3Q8N7X2 389 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 OR4F17Q8NGA8 305 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 OR5B3Q8NH48 314 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 BORCS7Q96B45 105 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 WDR61Q9GZS3 305 aaKnown RBP8.32□□□□□ -1.08
TOP3A-208ENST00000542570 ZNF430Q9H8G1 570 aaPredicted RBP8.32□□□□□ -1.08
TOP3A-208ENST00000542570 TECRQ9NZ01 308 aaKnown RBP8.32□□□□□ -1.08
TOP3A-208ENST00000542570 TDGF1P3P51864 188 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 LOXL3P58215 753 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 SLC16A13Q7RTY0 426 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 PDPNQ86YL7 162 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 NUP37Q8NFH4 326 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 OR51G1Q8NGK1 321 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 Q8WTZ3 238 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 GATAD1Q8WUU5 269 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 CTDSP1Q9GZU7 261 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 COL12A1Q99715 3063 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 IGLV3-9A0A075B6K5 115 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 TRAV34A0A0B4J273 112 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 RAB19A4D1S5 217 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 SHISA9B4DS77 424 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 GNG4P50150 75 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 ARL16Q0P5N6 197 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 BSXQ3C1V8 233 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 PRR31Q5SQ13 230 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 UTF1Q5T230 341 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 C16orf82Q7Z2V1 217 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 LYPD6Q86Y78 171 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 DPF1Q92782 380 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 NABP2Q9BQ15 211 aa8.32□□□□□ -1.08
TOP3A-208ENST00000542570 EFNA4P52798 201 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 RUSC1-AS1Q66K80 236 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 IL22RA2Q969J5 263 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 K7EQM0 130 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 IL4P05112 153 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 FABP4P15090 132 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 FAM3BP58499 235 aaPredicted RBP8.31□□□□□ -1.08
TOP3A-208ENST00000542570 CDSNQ15517 529 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 S100A7AQ86SG5 101 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 PPP1R27Q86WC6 154 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 SRSF12Q8WXF0 261 aaKnown RBP8.31□□□□□ -1.08
TOP3A-208ENST00000542570 WNT10AQ9GZT5 417 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 VAX2Q9UIW0 290 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 PGPA6NDG6 321 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 HYPMO75409 117 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 IGKV3-20P01619 116 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 DANCRP0C864 163 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 SMUG1Q53HV7 270 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms