RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 CCDC32Q9BV29 185 aa10.59□□□□□ -0.71
TNFSF13B-206ENST00000542136 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.59□□□□□ -0.71
TNFSF13B-206ENST00000542136 PTTG2Q9NZH5 202 aa10.59□□□□□ -0.71
TNFSF13B-206ENST00000542136 NSG2Q9Y328 171 aa10.59□□□□□ -0.71
TNFSF13B-206ENST00000542136 F11RQ9Y624 299 aaKnown RBP10.59□□□□□ -0.71
TNFSF13B-206ENST00000542136 A0A0B4J2A0 478 aa10.58□□□□□ -0.72
TNFSF13B-206ENST00000542136 DBX1A6NMT0 343 aa10.58□□□□□ -0.72
TNFSF13B-206ENST00000542136 SEC14L6B5MCN3 397 aa10.58□□□□□ -0.72
TNFSF13B-206ENST00000542136 OR2J3O76001 311 aa10.58□□□□□ -0.72
TNFSF13B-206ENST00000542136 AKR1C4P17516 323 aa10.58□□□□□ -0.72
TNFSF13B-206ENST00000542136 EXOSC2Q13868 293 aaKnown RBP10.58□□□□□ -0.72
TNFSF13B-206ENST00000542136 ACSM6Q6P461 480 aa10.58□□□□□ -0.72
TNFSF13B-206ENST00000542136 C1QL4Q86Z23 238 aa10.58□□□□□ -0.72
TNFSF13B-206ENST00000542136 OR1P1Q8NH06 330 aa10.58□□□□□ -0.72
TNFSF13B-206ENST00000542136 SHPKQ9UHJ6 478 aa10.58□□□□□ -0.72
TNFSF13B-206ENST00000542136 DUXBA0A1W2PPF3 345 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 ANKRD34BA5PLL1 514 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 NDUFB6O95139 128 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 NDUFB8O95169 186 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 REG1AP05451 166 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 ERHP84090 104 aaKnown RBP10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 TMEM268Q5VZI3 342 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 LGI3Q8N145 548 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 OR2C3Q8N628 320 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 LRTM2Q8N967 370 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 LHFPL5Q8TAF8 219 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 EEF1AKMT3Q96AZ1 226 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 ELOVL1Q9BW60 279 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 HINT2Q9BX68 163 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 SIGLEC8Q9NYZ4 499 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 DMRT1Q9Y5R6 373 aa10.57□□□□□ -0.72
TNFSF13B-206ENST00000542136 ST8SIA3O43173 380 aa10.56□□□□□ -0.72
TNFSF13B-206ENST00000542136 SLURP1P55000 103 aa10.56□□□□□ -0.72
TNFSF13B-206ENST00000542136 SPCS3P61009 180 aa10.56□□□□□ -0.72
TNFSF13B-206ENST00000542136 Q6ZRM9 215 aa10.56□□□□□ -0.72
TNFSF13B-206ENST00000542136 GPHB5Q86YW7 130 aa10.56□□□□□ -0.72
TNFSF13B-206ENST00000542136 CENPSQ8N2Z9 138 aa10.56□□□□□ -0.72
TNFSF13B-206ENST00000542136 RNASE11Q8TAA1 199 aaKnown RBP10.56□□□□□ -0.72
TNFSF13B-206ENST00000542136 PDCD10Q9BUL8 212 aa10.56□□□□□ -0.72
TNFSF13B-206ENST00000542136 PLEKHA3Q9HB20 300 aa10.56□□□□□ -0.72
TNFSF13B-206ENST00000542136 A0A0G2JRQ6 117 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 LGALS9O00182 355 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 BMPR1BO00238 502 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 GGCTO75223 188 aaKnown RBP10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 IFNA17P01571 189 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 SLC25A6P12236 298 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 MECP2P51608 486 aaKnown RBP10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 SUB1P53999 127 aaKnown RBP eCLIP10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 IZUMO4Q1ZYL8 232 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 RPEL1Q2QD12 228 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 NMSQ5H8A3 153 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 PVRIGQ6DKI7 326 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 SLC25A24Q6NUK1 477 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 SLC35G3Q8N808 338 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 CCDC140Q96MF4 163 aa10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 GAR1Q9NY12 217 aaKnown RBP10.55□□□□□ -0.72
TNFSF13B-206ENST00000542136 A0A1B0GU03 582 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 PLA2G10O15496 165 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 TRBV12-3P01733 135 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 SULT1A3P0DMM9 295 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 SULT1A4P0DMN0 295 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 FCGR2BP31994 310 aaPredicted RBP10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 SNCAP37840 140 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 CCR6P51684 374 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 MFAP2P55001 183 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 KRTAP10-11P60412 298 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 SPSB3Q6PJ21 355 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 C19orf35Q6ZS72 473 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 TMED4Q7Z7H5 227 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 OR9G4Q8NGQ1 327 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 GPR146Q96CH1 333 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 OR4C12Q96R67 309 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 TXN2Q99757 166 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 PEMTQ9UBM1 199 aa10.54□□□□□ -0.72
TNFSF13B-206ENST00000542136 CORTO00230 105 aa10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 SFT2D2O95562 160 aa10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 CLEC3BP05452 202 aa10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 BTCP35070 178 aa10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 ARL3P36405 182 aa10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 ATP5IP56385 69 aaPredicted RBP10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 DEFA5Q01523 94 aa10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 DCTN2Q13561 401 aaKnown RBP10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 BSXQ3C1V8 233 aa10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 FAM106AQ4KMX7 169 aa10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 LYZL2Q7Z4W2 148 aa10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 WDR12Q9GZL7 423 aaKnown RBP10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 CACNG5Q9UF02 275 aa10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 TMED3Q9Y3Q3 217 aa10.53□□□□□ -0.72
TNFSF13B-206ENST00000542136 MFSD2BA6NFX1 497 aa10.52□□□□□ -0.73
TNFSF13B-206ENST00000542136 K7EIM0 57 aa10.52□□□□□ -0.73
TNFSF13B-206ENST00000542136 LYRM1O43325 122 aa10.52□□□□□ -0.73
TNFSF13B-206ENST00000542136 SAP30O75446 220 aa10.52□□□□□ -0.73
TNFSF13B-206ENST00000542136 HLA-AP01891 365 aaKnown RBP10.52□□□□□ -0.73
TNFSF13B-206ENST00000542136 VAMP1P23763 118 aa10.52□□□□□ -0.73
TNFSF13B-206ENST00000542136 SYNJ2BPP57105 145 aa10.52□□□□□ -0.73
TNFSF13B-206ENST00000542136 PPP1R1AQ13522 171 aa10.52□□□□□ -0.73
TNFSF13B-206ENST00000542136 ZNF846Q147U1 533 aa10.52□□□□□ -0.73
TNFSF13B-206ENST00000542136 SMCO1Q147U7 214 aa10.52□□□□□ -0.73
TNFSF13B-206ENST00000542136 CLEC19AQ6UXS0 136 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms