RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 C17orf100A8MU93 164 aa9.04□□□□□ -0.96
GABRB3-204ENST00000541819 TMEM14DPA8MWL7 114 aa9.04□□□□□ -0.96
GABRB3-204ENST00000541819 KLF4O43474 513 aa9.04□□□□□ -0.96
GABRB3-204ENST00000541819 SAP30O75446 220 aa9.04□□□□□ -0.96
GABRB3-204ENST00000541819 HBDP02042 147 aa9.04□□□□□ -0.96
GABRB3-204ENST00000541819 FAM201AQ5SY85 155 aa9.04□□□□□ -0.96
GABRB3-204ENST00000541819 MORN3Q6PF18 240 aaPredicted RBP9.04□□□□□ -0.96
GABRB3-204ENST00000541819 DMRT1Q9Y5R6 373 aa9.04□□□□□ -0.96
GABRB3-204ENST00000541819 LOC102723996A0A087X1L8 192 aa9.04□□□□□ -0.96
GABRB3-204ENST00000541819 TOMM40O96008 361 aa9.04□□□□□ -0.96
GABRB3-204ENST00000541819 THBDP07204 575 aa9.04□□□□□ -0.96
GABRB3-204ENST00000541819 ERVK11-1P61568 191 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 FUT5Q11128 374 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 ST6GALNAC6Q969X2 333 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 C14orf144Q96I85 54 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 CHTOPQ9Y3Y2 248 aaKnown RBP9.03□□□□□ -0.96
GABRB3-204ENST00000541819 A0A087WX48 190 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 MIR17HGQ75NE6 70 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 NIT1Q86X76 327 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 C17orf98A8MV24 154 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 ORMDL2Q53FV1 153 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 SIGLEC5O15389 551 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 FBLN7Q53RD9 439 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 GFI1BQ5VTD9 330 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 C5orf30Q96GV9 206 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 RCC1LQ96I51 464 aaKnown RBP9.03□□□□□ -0.96
GABRB3-204ENST00000541819 MS4A6AQ9H2W1 248 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 WNT2P09544 360 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 ZNF883P0CG24 379 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 ATXN8Q156A1 80 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 ZNF600Q6ZNG1 722 aa9.03□□□□□ -0.96
GABRB3-204ENST00000541819 NPIPB13A6NJU9 1138 aa9.02□□□□□ -0.97
GABRB3-204ENST00000541819 OVOL1O14753 267 aa9.02□□□□□ -0.97
GABRB3-204ENST00000541819 DPM2O94777 84 aa9.02□□□□□ -0.97
GABRB3-204ENST00000541819 RHOGP84095 191 aa9.02□□□□□ -0.97
GABRB3-204ENST00000541819 ZNF585BQ52M93 769 aa9.02□□□□□ -0.97
GABRB3-204ENST00000541819 RGPD4Q7Z3J3 1758 aa9.02□□□□□ -0.97
GABRB3-204ENST00000541819 SPSB2Q99619 263 aa9.02□□□□□ -0.97
GABRB3-204ENST00000541819 VKORC1Q9BQB6 163 aa9.02□□□□□ -0.97
GABRB3-204ENST00000541819 DERL1Q9BUN8 251 aa9.02□□□□□ -0.97
GABRB3-204ENST00000541819 LINC00587B1AMM8 73 aa9.02□□□□□ -0.97
GABRB3-204ENST00000541819 IQCF6A8MYZ5 107 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 CELA3AP09093 270 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 RNF125Q96EQ8 232 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 IMMP2LQ96T52 175 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 RPL32P62910 135 aaKnown RBP9.01□□□□□ -0.97
GABRB3-204ENST00000541819 GATD1Q8NB37 220 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 M0R2P5 195 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 RFPL3SP0C7P2 107 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 ZNF708P17019 499 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 IGHV1-2P23083 117 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 EFNB1P98172 346 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 SLC25A28Q96A46 364 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 HIGD1CA8MV81 97 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 CD33P20138 364 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 ATP5G3P48201 142 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 C11orf44Q8N8P7 122 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 REPIN1Q9BWE0 567 aaKnown RBP9.01□□□□□ -0.97
GABRB3-204ENST00000541819 CLDN16Q9Y5I7 305 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 UPK2O00526 184 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 SIGLEC15Q6ZMC9 328 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 COQ2Q96H96 371 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 TM2D1Q9BX74 207 aa9.01□□□□□ -0.97
GABRB3-204ENST00000541819 IGLV3-21P80748 117 aaPredicted RBP9□□□□□ -0.97
GABRB3-204ENST00000541819 PAX8Q06710 450 aa9□□□□□ -0.97
GABRB3-204ENST00000541819 ST6GALNAC3Q8NDV1 305 aa9□□□□□ -0.97
GABRB3-204ENST00000541819 TMEM133Q9H2Q1 129 aa9□□□□□ -0.97
GABRB3-204ENST00000541819 EDA2RQ9HAV5 297 aa9□□□□□ -0.97
GABRB3-204ENST00000541819 LAMTOR3Q9UHA4 124 aa9□□□□□ -0.97
GABRB3-204ENST00000541819 SAA2-SAA4A0A096LPE2 208 aa9□□□□□ -0.97
GABRB3-204ENST00000541819 SAA2P0DJI9 122 aaPredicted RBP9□□□□□ -0.97
GABRB3-204ENST00000541819 GNG5P63218 68 aa9□□□□□ -0.97
GABRB3-204ENST00000541819 CFHR5Q9BXR6 569 aa9□□□□□ -0.97
GABRB3-204ENST00000541819 LINC01549A6NIU2 74 aa9□□□□□ -0.97
GABRB3-204ENST00000541819 CHCHD2Q9Y6H1 151 aaPredicted RBP9□□□□□ -0.97
GABRB3-204ENST00000541819 ITGB4P16144 1822 aa9□□□□□ -0.97
GABRB3-204ENST00000541819 LRP5O75197 1615 aa9□□□□□ -0.97
GABRB3-204ENST00000541819 RCHY1Q96PM5 261 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 NHP2Q9NX24 153 aaKnown RBP8.99□□□□□ -0.97
GABRB3-204ENST00000541819 H3BUT2 72 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 TIAF1O95411 115 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 LGALS1P09382 135 aaKnown RBP8.99□□□□□ -0.97
GABRB3-204ENST00000541819 OR9G9P0C7N8 305 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 SMIM10L1P0DMW3 83 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 ZP1P60852 638 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 CYB5R2Q6BCY4 276 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 SMIM10Q96HG1 83 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 TRAV40A0A0B4J280 105 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 PIN1P1O15428 100 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 H2BFSP57053 126 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 C1QTNF5Q9BXJ0 243 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 IGKCP01834 107 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 PPBPP02775 128 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 CEACAM8P31997 349 aaPredicted RBP8.99□□□□□ -0.97
GABRB3-204ENST00000541819 SPRED2Q7Z698 418 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 ZNF562Q6V9R5 426 aa8.99□□□□□ -0.97
GABRB3-204ENST00000541819 CCL3L1P16619 93 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 GATA2P23769 480 aaPredicted RBP8.98□□□□□ -0.97
GABRB3-204ENST00000541819 TNRC6CQ9HCJ0 1690 aaKnown RBP8.98□□□□□ -0.97
GABRB3-204ENST00000541819 A0A0U1RRA0 63 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms