RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 ZNF600Q6ZNG1 722 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 TCF23Q7RTU1 214 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 BPIFA4PQ86YQ2 179 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 NPIPB3Q92617 1050 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 MRPL18Q9H0U6 180 aaKnown RBP12.09□□□□□ -0.47
GCFC2-211ENST00000541687 GLRXP35754 106 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 NMUP48645 174 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 TMEM97Q5BJF2 176 aa12.09□□□□□ -0.47
GCFC2-211ENST00000541687 NUBP1P53384 320 aa12.08□□□□□ -0.48
GCFC2-211ENST00000541687 ZNF146Q15072 292 aa12.08□□□□□ -0.48
GCFC2-211ENST00000541687 COX19Q49B96 90 aa12.08□□□□□ -0.48
GCFC2-211ENST00000541687 PRRX1P54821 245 aa12.08□□□□□ -0.48
GCFC2-211ENST00000541687 SRSF9Q13242 221 aaKnown RBP eCLIP12.08□□□□□ -0.489e-7■■□□□ 12.4
GCFC2-211ENST00000541687 IBA57Q5T440 356 aaKnown RBP12.08□□□□□ -0.48
GCFC2-211ENST00000541687 SONP18583 2426 aaKnown RBP12.08□□□□□ -0.48
GCFC2-211ENST00000541687 LINC00473A8K010 186 aa12.08□□□□□ -0.48
GCFC2-211ENST00000541687 HIST1H1BP16401 226 aaKnown RBP12.08□□□□□ -0.48
GCFC2-211ENST00000541687 CCL3L1P16619 93 aa12.08□□□□□ -0.48
GCFC2-211ENST00000541687 PSMB2P49721 201 aa12.08□□□□□ -0.48
GCFC2-211ENST00000541687 RELBQ01201 579 aa12.08□□□□□ -0.48
GCFC2-211ENST00000541687 MORN2Q502X0 79 aa12.08□□□□□ -0.48
GCFC2-211ENST00000541687 ZNF585BQ52M93 769 aa12.08□□□□□ -0.48
GCFC2-211ENST00000541687 IGHV1-18A0A0C4DH31 117 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 SS18L1O75177 396 aaPredicted RBP12.07□□□□□ -0.48
GCFC2-211ENST00000541687 HIST1H1EP10412 219 aaKnown RBP12.07□□□□□ -0.48
GCFC2-211ENST00000541687 KIR2DL2P43627 348 aaPredicted RBP12.07□□□□□ -0.48
GCFC2-211ENST00000541687 LBHQ53QV2 105 aaPredicted RBP12.07□□□□□ -0.48
GCFC2-211ENST00000541687 TMEM183AQ8IXX5 376 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 THYN1Q9P016 225 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 HSPB7Q9UBY9 170 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 PTPRSQ13332 1948 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 K7ERU9 68 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 MLNRO43193 412 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 MMDQ15546 238 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 HILPDAQ9Y5L2 63 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 MUC6Q6W4X9 2439 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 FOXI3A8MTJ6 420 aaPredicted RBP12.07□□□□□ -0.48
GCFC2-211ENST00000541687 DUTP33316 252 aaKnown RBP12.07□□□□□ -0.48
GCFC2-211ENST00000541687 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 MMD2Q8IY49 270 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 DERL1Q9BUN8 251 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 DNAH14Q0VDD8 3507 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 TRAV3A0A0B4J244 114 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 ZNF207O43670 478 aaKnown RBP12.07□□□□□ -0.48
GCFC2-211ENST00000541687 MIR17HGQ75NE6 70 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 ZNF738Q8NE65 137 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 PLA2G2EQ9NZK7 142 aa12.07□□□□□ -0.48
GCFC2-211ENST00000541687 DENND4AQ7Z401 1863 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 SAA2-SAA4A0A096LPE2 208 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 MOSP00540 346 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 SAA2P0DJI9 122 aaPredicted RBP12.06□□□□□ -0.48
GCFC2-211ENST00000541687 MYOD1P15172 320 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 PAX9P55771 341 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 TIMM23BQ5SRD1 257 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 COQ2Q96H96 371 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 ISLRO14498 428 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 DKK1O94907 266 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 PCP4P48539 62 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 MBD3L1Q8WWY6 194 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 RAB37Q96AX2 223 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 ATG101Q9BSB4 218 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 PGPA6NDG6 321 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 PRB4P10163 310 aaPredicted RBP12.06□□□□□ -0.48
GCFC2-211ENST00000541687 RIGQ13278 110 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 KRTCAP3Q53RY4 240 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 RASL11BQ9BPW5 248 aa12.06□□□□□ -0.48
GCFC2-211ENST00000541687 FOLR2P14207 255 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 PRNTQ86SH4 94 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 MDS2Q8NDY4 140 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 OR2T8A6NH00 312 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 RPL27AP46776 148 aaKnown RBP12.05□□□□□ -0.48
GCFC2-211ENST00000541687 CD81P60033 236 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 SPATA45Q537H7 98 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 CD177Q8N6Q3 437 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 SSC4DQ8WTU2 575 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 KBTBD11-OT1A0A1B0GTJ5 212 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 OR4C46A6NHA9 309 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 M0QZ24 198 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 C8orf88P0DMB2 117 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 C1orf174Q8IYL3 243 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 MRPL37Q9BZE1 423 aaKnown RBP12.05□□□□□ -0.48
GCFC2-211ENST00000541687 IGKV1-39P01597 117 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 IGKV1D-39P04432 117 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 PYY3Q5JQD4 70 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 DGAT2L7PQ6IED9 249 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 DNAJC4Q9NNZ3 241 aa12.05□□□□□ -0.48
GCFC2-211ENST00000541687 YLPM1P49750 1951 aaKnown RBP12.04□□□□□ -0.48
GCFC2-211ENST00000541687 WDR86Q86TI4 376 aa12.04□□□□□ -0.48
GCFC2-211ENST00000541687 TNFRSF19Q9NS68 423 aa12.04□□□□□ -0.48
GCFC2-211ENST00000541687 H3BVH4 76 aa12.04□□□□□ -0.48
GCFC2-211ENST00000541687 SRIP30626 198 aa12.04□□□□□ -0.48
GCFC2-211ENST00000541687 ARL6IP6Q8N6S5 226 aa12.04□□□□□ -0.48
GCFC2-211ENST00000541687 PERPQ96FX8 193 aa12.04□□□□□ -0.48
GCFC2-211ENST00000541687 AMMECR1Q9Y4X0 333 aaPredicted RBP12.04□□□□□ -0.48
GCFC2-211ENST00000541687 ARFGEF3Q5TH69 2177 aa12.04□□□□□ -0.48
GCFC2-211ENST00000541687 GCGP01275 180 aa12.04□□□□□ -0.48
GCFC2-211ENST00000541687 PAFAH1B2P68402 229 aa12.04□□□□□ -0.48
GCFC2-211ENST00000541687 SRSF7Q16629 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms