RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 CT45A5P0DMU8 189 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 CT45A7P0DMV0 189 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 CCL3L1P16619 93 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 ZP3P21754 424 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 HTR1DP28221 377 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 SNCAP37840 140 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 SLC38A11Q08AI6 406 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 PJVKQ0ZLH3 352 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 CLINT1Q14677 625 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 AANATQ16613 207 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 LRRC75BQ2VPJ9 315 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 HLA-DRB5Q30154 266 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 MINOS1Q5TGZ0 78 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 OR4A47Q6IF82 309 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 TMEM217Q8N7C4 229 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 ZNF383Q8NA42 475 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 TEX45Q8NA69 505 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 OR1L8Q8NGR8 309 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 OR2G3Q8NGZ4 309 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 CLDND2Q8NHS1 167 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 ST6GALNAC6Q969X2 333 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 C5orf30Q96GV9 206 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 SRSF8Q9BRL6 282 aaKnown RBP6.73□□□□□ -1.33
CHD4-208ENST00000540960 DPM3Q9P2X0 92 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 ONECUT1Q9UBC0 465 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 OR51B2Q9Y5P1 312 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 MINOS1-NBL1R4GNA1 71 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 TRAV1-1A0A0B4J248 108 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 BUB1B-PAK6H3BSN5 160 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 K7EIL1 84 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 SLC31A2O15432 143 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 PROP1O75360 226 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 NDUFS6O75380 124 aaKnown RBP6.72□□□□□ -1.33
CHD4-208ENST00000540960 FSHBP01225 129 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 IGLV1-47P01700 117 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 ARG1P05089 322 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 METTL15P1P0C7V9 234 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 IAPPP10997 89 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 PPT1P50897 306 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 LGALS4P56470 323 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 BRWD1-AS2P59051 145 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 RPS16P62249 146 aaKnown RBP6.72□□□□□ -1.33
CHD4-208ENST00000540960 RPL8P62917 257 aaKnown RBP6.72□□□□□ -1.33
CHD4-208ENST00000540960 DLK1P80370 383 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 HOXA4Q00056 320 aaPredicted RBP6.72□□□□□ -1.33
CHD4-208ENST00000540960 RELBQ01201 579 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 AVPI1Q5T686 147 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 DUX4L9Q6RFH8 374 aaPredicted RBP6.72□□□□□ -1.33
CHD4-208ENST00000540960 RBMS3Q6XE24 437 aaKnown RBP6.72□□□□□ -1.33
CHD4-208ENST00000540960 CENPVQ7Z7K6 275 aaPredicted RBP6.72□□□□□ -1.33
CHD4-208ENST00000540960 CCDC28AQ8IWP9 274 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 MMD2Q8IY49 270 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 HSD17B11Q8NBQ5 300 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 OR1L6Q8NGR2 347 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 NANPQ8TBE9 248 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 TMEM167AQ8TBQ9 72 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 CACNG8Q8WXS5 425 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 LEAP2Q969E1 77 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 HARBI1Q96MB7 349 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 NABP2Q9BQ15 211 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 MS4A7Q9GZW8 240 aaPredicted RBP6.72□□□□□ -1.33
CHD4-208ENST00000540960 TCF19Q9Y242 345 aa6.72□□□□□ -1.33
CHD4-208ENST00000540960 SOX21Q9Y651 276 aaPredicted RBP6.72□□□□□ -1.33
CHD4-208ENST00000540960 A0A1B0GW64 132 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 CORTO00230 105 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 MMP23AO75900 390 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 TMEM50AO95807 157 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 IFNA1P01562 189 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 IFNA4P05014 189 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 IL6RP08887 468 aaPredicted RBP6.71□□□□□ -1.34
CHD4-208ENST00000540960 H2AFB1P0C5Y9 115 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 ATP6V0CP27449 155 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 CD1BP29016 333 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 PRCDQ00LT1 54 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 VWC2Q2TAL6 325 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 FAM74A1Q5RGS3 127 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 ETFRF1Q6IPR1 90 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 ETV3LQ6ZN32 361 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 SSX9Q7RTT3 188 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 SLC24A4Q8NFF2 622 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 LYPD6BQ8NI32 183 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 SUN5Q8TC36 379 aa6.71□□□□□ -1.34
CHD4-208ENST00000540960 QTRT1Q9BXR0 403 aaKnown RBP6.71□□□□□ -1.34
CHD4-208ENST00000540960 MRPL20Q9BYC9 149 aaKnown RBP6.71□□□□□ -1.34
CHD4-208ENST00000540960 WDR61Q9GZS3 305 aaKnown RBP6.71□□□□□ -1.34
CHD4-208ENST00000540960 POLR3KQ9Y2Y1 108 aaPredicted RBP6.71□□□□□ -1.34
CHD4-208ENST00000540960 TBL2Q9Y4P3 447 aaKnown RBP6.71□□□□□ -1.34
CHD4-208ENST00000540960 A0A1W2PPE3 182 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 MEX3AA1L020 520 aaKnown RBP6.7□□□□□ -1.34
CHD4-208ENST00000540960 IGHV2-5P01817 119 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 OR9G9P0C7N8 305 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 NPY1RP25929 384 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 GPX4P36969 197 aaPredicted RBP6.7□□□□□ -1.34
CHD4-208ENST00000540960 VDAC2P45880 294 aaPredicted RBP6.7□□□□□ -1.34
CHD4-208ENST00000540960 ZNF616Q08AN1 781 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 TMEM267Q0VDI3 215 aaPredicted RBP6.7□□□□□ -1.34
CHD4-208ENST00000540960 PMS2P11Q13670 270 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 ACOT6Q3I5F7 207 aaPredicted RBP6.7□□□□□ -1.34
CHD4-208ENST00000540960 OR8G2PQ6IF36 304 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 BTNL8Q6UX41 500 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms