RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 HIST1H2BJP06899 126 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 IL6RP08887 468 aaPredicted RBP13.67□□□□□ -0.22
COPS3-212ENST00000539941 IAPPP10997 89 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 HIST1H2BOP23527 126 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 HIST1H2BBP33778 126 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 HIST1H2BDP58876 126 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 HIST1H2BCP62807 126 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 HIST2H2BEQ16778 126 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.67□□□□□ -0.22
COPS3-212ENST00000539941 VKORC1L1Q8N0U8 176 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 HIST1H2BHQ93079 126 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 FLYWCH2Q96CP2 140 aaKnown RBP13.67□□□□□ -0.22
COPS3-212ENST00000539941 PACRGQ96M98 296 aaPredicted RBP13.67□□□□□ -0.22
COPS3-212ENST00000539941 HIST1H2BNQ99877 126 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 HIST1H2BMQ99879 126 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 BET1LQ9NYM9 111 aa13.67□□□□□ -0.22
COPS3-212ENST00000539941 FOXA2Q9Y261 457 aaPredicted RBP13.67□□□□□ -0.22
COPS3-212ENST00000539941 LY6LH3BQJ8 138 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 DIAPH2-AS1Q14236 149 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 DTD1Q8TEA8 209 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 RCC1LQ96I51 464 aaKnown RBP13.66□□□□□ -0.22
COPS3-212ENST00000539941 HARBI1Q96MB7 349 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 QTRT1Q9BXR0 403 aaKnown RBP13.66□□□□□ -0.22
COPS3-212ENST00000539941 SMIM3Q9BZL3 60 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 PRNDQ9UKY0 176 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 MYO9AB2RTY4 2548 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 ODF3BA8MYP8 253 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 HTR1DP28221 377 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 CAMLGP49069 296 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 LCN2P80188 198 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 ZNF266Q14584 549 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 RPEQ96AT9 228 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 BSCL2Q96G97 398 aaPredicted RBP13.66□□□□□ -0.22
COPS3-212ENST00000539941 SIRPDQ9H106 197 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 TMEM14BQ9NUH8 114 aa13.66□□□□□ -0.22
COPS3-212ENST00000539941 CSMD2Q7Z408 3487 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 CEBPZOSA8MTT3 80 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 UPK2O00526 184 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 SCAF4O95104 1147 aaKnown RBP13.65□□□□□ -0.22
COPS3-212ENST00000539941 CEACAM3P40198 252 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 DLX1P56177 255 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 HCP5Q6MZN7 132 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 VMO1Q7Z5L0 202 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 OR4A5Q8NH83 315 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 VSTM2AQ8TAG5 236 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 GPR61Q9BZJ8 451 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 PRO1933Q9H354 126 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 WFDC1Q9HC57 220 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 FKBP11Q9NYL4 201 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 DPM3Q9P2X0 92 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 INSIG2Q9Y5U4 225 aa13.65□□□□□ -0.22
COPS3-212ENST00000539941 IGHV1-3A0A0C4DH29 117 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 SRRM4A7MD48 611 aaKnown RBP13.64□□□□□ -0.23
COPS3-212ENST00000539941 H3BP45 60 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 M0R143 59 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 DFFBO76075 338 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 LGALS7P47929 136 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 HAGHQ16775 308 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 CDPF1Q6NVV7 123 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 TMEM14EPQ6UXP3 125 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 OR5C1Q8NGR4 320 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 PERPQ96FX8 193 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 C20orf24Q9BUV8 137 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 ZNF257Q9Y2Q1 563 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 ARHGAP32A7KAX9 2087 aa13.64□□□□□ -0.23
COPS3-212ENST00000539941 TRAV3A0A0B4J244 114 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 CST7O76096 145 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 SAA1P0DJI8 122 aaPredicted RBP13.63□□□□□ -0.23
COPS3-212ENST00000539941 DYNLT3P51808 116 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 HSPE1P61604 102 aaKnown RBP13.63□□□□□ -0.23
COPS3-212ENST00000539941 RPS16P62249 146 aaKnown RBP13.63□□□□□ -0.23
COPS3-212ENST00000539941 HBG1P69891 147 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 HBG2P69892 147 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 ELOBQ15370 118 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 SPANXN5Q5MJ07 72 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 TPTE2P1Q5T6R2 138 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 GINS3Q9BRX5 216 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 AKAP9Q99996 3911 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 IGHV4-61A0A0C4DH41 118 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 KBTBD11O94819 623 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 FABP4P15090 132 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 USF1P22415 310 aaPredicted RBP13.63□□□□□ -0.23
COPS3-212ENST00000539941 RPP30P78346 268 aaKnown RBP13.63□□□□□ -0.23
COPS3-212ENST00000539941 PRB3Q04118 309 aaPredicted RBP13.63□□□□□ -0.23
COPS3-212ENST00000539941 COTL1Q14019 142 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 MINOS1Q5TGZ0 78 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 SLC35E3Q7Z769 313 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 ATP5SQ99766 215 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 TMEM242Q9NWH2 141 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 TCF19Q9Y242 345 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 GOLT1BQ9Y3E0 138 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 MINOS1-NBL1R4GNA1 71 aa13.63□□□□□ -0.23
COPS3-212ENST00000539941 IGHV4-30-2A0A087WSY4 118 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 OOSP1A8MZH6 123 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 TOX4O94842 621 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 SLC25A16P16260 332 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 HOXB4P17483 251 aaPredicted RBP13.62□□□□□ -0.23
COPS3-212ENST00000539941 TAGLN2P37802 199 aaKnown RBP13.62□□□□□ -0.23
COPS3-212ENST00000539941 ZNF616Q08AN1 781 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 TMEM267Q0VDI3 215 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms