RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CCL17Q92583 94 aa11.46□□□□□ -0.58
UBE3B-210ENST00000539599 PLEKHA3Q9HB20 300 aa11.46□□□□□ -0.58
UBE3B-210ENST00000539599 TUBG2Q9NRH3 451 aa11.46□□□□□ -0.58
UBE3B-210ENST00000539599 ELOVL5Q9NYP7 299 aa11.46□□□□□ -0.58
UBE3B-210ENST00000539599 FOXA2Q9Y261 457 aaPredicted RBP11.46□□□□□ -0.58
UBE3B-210ENST00000539599 TP53TG5Q9Y2B4 290 aa11.46□□□□□ -0.58
UBE3B-210ENST00000539599 A0A087X0M5 115 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 IGHV3-72A0A0B4J1Y9 119 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 A0A1B0GV90 55 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 A0A1B0GX30 115 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 REG1AP05451 166 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 RAB7AP51149 207 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 CNN1P51911 297 aaKnown RBP11.45□□□□□ -0.58
UBE3B-210ENST00000539599 TCL1AP56279 114 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 PRR30Q53SZ7 412 aaPredicted RBP11.45□□□□□ -0.58
UBE3B-210ENST00000539599 KCNIP4Q6PIL6 250 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 Q6ZS92 163 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 TMEM144Q7Z5S9 345 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 FAM222BQ8WU58 562 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 ACY3Q96HD9 319 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 RITA1Q96K30 269 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 NABP2Q9BQ15 211 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 RNASE7Q9H1E1 156 aaKnown RBP11.45□□□□□ -0.58
UBE3B-210ENST00000539599 TRGV8A0A0C4DH27 118 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 A0A0G2JNJ9 132 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 OR7C2O60412 319 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 DDTP30046 118 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 SRP14P37108 136 aaKnown RBP11.45□□□□□ -0.58
UBE3B-210ENST00000539599 TMPRSS3P57727 454 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 JOSD1Q15040 202 aaPredicted RBP11.45□□□□□ -0.58
UBE3B-210ENST00000539599 CISD2Q8N5K1 135 aaKnown RBP11.45□□□□□ -0.58
UBE3B-210ENST00000539599 LINC00479Q96M42 142 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 Q9UFV3 132 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 DPRXA6NFQ7 191 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 DVL1O14640 695 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 MPDU1O75352 247 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 PLAUP00749 431 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 BSPH1Q075Z2 132 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 UHRF2Q96PU4 802 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 TPSG1Q9NRR2 321 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 IL19Q9UHD0 177 aa11.45□□□□□ -0.58
UBE3B-210ENST00000539599 RPUSD1Q9UJJ7 312 aaKnown RBP11.45□□□□□ -0.58
UBE3B-210ENST00000539599 COL12A1Q99715 3063 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 IGF2RP11717 2491 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 FAM90A9PA6NNJ1 464 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 TGOLN2O43493 480 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 PRR20EP86478 221 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 PRR20CP86479 221 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 PRR20DP86480 221 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 PRR20BP86481 221 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 PRR20AP86496 221 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 SSX2Q16385 188 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 IGFBPL1Q8WX77 278 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 SLC25A10Q9UBX3 287 aaPredicted RBP11.44□□□□□ -0.58
UBE3B-210ENST00000539599 IGHV3-21A0A0B4J1V1 117 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 UPK2O00526 184 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
UBE3B-210ENST00000539599 RNF224P0DH78 156 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 RHOBP62745 196 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 SLC25A48Q6ZT89 311 aaKnown RBP11.44□□□□□ -0.58
UBE3B-210ENST00000539599 FAM169BQ8N8A8 192 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 OR10G8Q8NGN5 311 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 HARBI1Q96MB7 349 aa11.44□□□□□ -0.58
UBE3B-210ENST00000539599 GATA4P43694 442 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 ZNF90Q03938 601 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 ADIPOQQ15848 244 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 KRTCAP3Q53RY4 240 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 PQLC2Q6ZP29 291 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 LINC00469Q8N7U9 141 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 MRPL36Q9P0J6 103 aaKnown RBP11.43□□□□□ -0.58
UBE3B-210ENST00000539599 TP53TG3Q9ULZ0 132 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 GGTLC3B5MD39 225 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 TYMSP04818 313 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 IRF2P14316 349 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 KIR2DS2P43631 304 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 SELENOVP59797 346 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 SGK494Q96LW2 274 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 SLC45A2Q9UMX9 530 aa11.43□□□□□ -0.58
UBE3B-210ENST00000539599 PRCDQ00LT1 54 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 KIAA1644Q3SXP7 199 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 CENPWQ5EE01 88 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 TMEM200BQ69YZ2 307 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 MED13LQ71F56 2210 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 THBDP07204 575 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 PYYP10082 97 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 IER3P46695 156 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 RPL29P47914 159 aaKnown RBP11.42□□□□□ -0.58
UBE3B-210ENST00000539599 ERVFC1-1P60608 527 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 PKIAP61925 76 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 SUMO1P63165 101 aaKnown RBP11.42□□□□□ -0.58
UBE3B-210ENST00000539599 OR8I2Q8N0Y5 310 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 ABHD17AQ96GS6 310 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 EAF1Q96JC9 268 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-210ENST00000539599 ZMAT5Q9UDW3 170 aaKnown RBP11.42□□□□□ -0.58
UBE3B-210ENST00000539599 ARHGAP32A7KAX9 2087 aa11.42□□□□□ -0.58
UBE3B-210ENST00000539599 MALRD1Q5VYJ5 2156 aa11.41□□□□□ -0.58
UBE3B-210ENST00000539599 LYNX1G3V0Z9 82 aa11.41□□□□□ -0.58
UBE3B-210ENST00000539599 LYNX1P0DP58 116 aa11.41□□□□□ -0.58
UBE3B-210ENST00000539599 RNASE2P10153 161 aaKnown RBP11.41□□□□□ -0.58
UBE3B-210ENST00000539599 LINC00310P59036 64 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms