RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 DLEU1O43261 78 aa10.85□□□□□ -0.67
UBE3B-209ENST00000539584 LINC00614P0C842 121 aa10.85□□□□□ -0.67
UBE3B-209ENST00000539584 ZNF25P17030 456 aaPredicted RBP10.85□□□□□ -0.67
UBE3B-209ENST00000539584 KLF3P57682 345 aaPredicted RBP10.85□□□□□ -0.67
UBE3B-209ENST00000539584 IBA57Q5T440 356 aaKnown RBP10.85□□□□□ -0.67
UBE3B-209ENST00000539584 HES3Q5TGS1 186 aa10.85□□□□□ -0.67
UBE3B-209ENST00000539584 FAM231DQ6ZW35 169 aa10.85□□□□□ -0.67
UBE3B-209ENST00000539584 PLPPR2Q96GM1 343 aa10.85□□□□□ -0.67
UBE3B-209ENST00000539584 CDC42EP3Q9UKI2 254 aa10.85□□□□□ -0.67
UBE3B-209ENST00000539584 DIDO1Q9BTC0 2240 aaKnown RBP10.85□□□□□ -0.67
UBE3B-209ENST00000539584 OR7C2O60412 319 aa10.85□□□□□ -0.67
UBE3B-209ENST00000539584 COMPP49747 757 aaPredicted RBP10.85□□□□□ -0.67
UBE3B-209ENST00000539584 TMPRSS7Q7RTY8 843 aa10.85□□□□□ -0.67
UBE3B-209ENST00000539584 LYG1Q8N1E2 194 aa10.85□□□□□ -0.67
UBE3B-209ENST00000539584 SLC25A33Q9BSK2 321 aa10.85□□□□□ -0.67
UBE3B-209ENST00000539584 AHCTF1Q8WYP5 2266 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 IGLV3-9A0A075B6K5 115 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 IZUMO1RA6ND01 250 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 DIRC3C9JPN6 131 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 SUMO1P63165 101 aaKnown RBP10.84□□□□□ -0.67
UBE3B-209ENST00000539584 CD69Q07108 199 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 OR5I1Q13606 314 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 TIMM23BQ5SRD1 257 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 C1orf229Q6ZS94 237 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-209ENST00000539584 SLC25A48Q6ZT89 311 aaKnown RBP10.84□□□□□ -0.67
UBE3B-209ENST00000539584 KLHDC1Q8N7A1 406 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 OSR1Q8TAX0 266 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-209ENST00000539584 STARD4Q96DR4 205 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 IGF2BP2-AS1Q96M15 143 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 RNF7Q9UBF6 113 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 PAM16Q9Y3D7 125 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 TBL2Q9Y4P3 447 aaKnown RBP10.84□□□□□ -0.67
UBE3B-209ENST00000539584 HCFC1P51610 2035 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 CDX4O14627 284 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-209ENST00000539584 ZNF324O75467 553 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-209ENST00000539584 ACTL6BO94805 426 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 IRF2P14316 349 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 CDKN1AP38936 164 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 AMTP48728 403 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 COL5A1-AS1Q5SY13 56 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 DHRS13Q6UX07 377 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 MOGAT3Q86VF5 341 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 SMIM12Q96EX1 92 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 ZNF503Q96F45 646 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 ZNF714Q96N38 554 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 TMEM208Q9BTX3 173 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 ZNF331Q9NQX6 463 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-209ENST00000539584 SLC35D1Q9NTN3 355 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 UQCR10Q9UDW1 63 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 GOLT1BQ9Y3E0 138 aa10.84□□□□□ -0.67
UBE3B-209ENST00000539584 MED13Q9UHV7 2174 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 IGHV3OR15-7A0A075B7D8 119 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 TEX50A0A1B0GTY4 177 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 GGTLC3B5MD39 225 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 IGLV2-8P01709 118 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 CTRLP40313 264 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 PRRX1P54821 245 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 SELENOVP59797 346 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 ERHP84090 104 aaKnown RBP10.83□□□□□ -0.68
UBE3B-209ENST00000539584 STUMQ69YW2 141 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 DOLPP1Q86YN1 238 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 OR1L4Q8NGR5 311 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 HINT2Q9BX68 163 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 RPUSD1Q9UJJ7 312 aaKnown RBP10.83□□□□□ -0.68
UBE3B-209ENST00000539584 FBXL7Q9UJT9 491 aa10.83□□□□□ -0.68
UBE3B-209ENST00000539584 A0A1W2PN81 502 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 A0A1W2PS18 150 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 MBD3L4A6NDZ8 208 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-209ENST00000539584 MBD3L3A6NE82 208 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-209ENST00000539584 MBD3L5A6NJ08 208 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-209ENST00000539584 PMCHL1Q16048 86 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 TDRG1Q3Y452 100 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 ATP1A1-AS1Q5TC04 95 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 OR4A5Q8NH83 315 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 MBD3L2Q8NHZ7 208 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-209ENST00000539584 RNASE7Q9H1E1 156 aaKnown RBP10.82□□□□□ -0.68
UBE3B-209ENST00000539584 DNAJC4Q9NNZ3 241 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 IGKV1OR2-108A0A075B7D4 117 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 C20orf202A1L168 122 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 DLL1O00548 723 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 APCSP02743 223 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 CT45A6P0DMU7 189 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 CT45A5P0DMU8 189 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 CT45A7P0DMV0 189 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 RNASE2P10153 161 aaKnown RBP10.82□□□□□ -0.68
UBE3B-209ENST00000539584 G0S2P27469 103 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 KRTDAPP60985 99 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 FAM162BQ5T6X4 162 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 Q8N976 141 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 GCM1Q9NP62 436 aa10.82□□□□□ -0.68
UBE3B-209ENST00000539584 hADV38S2A0JD32 116 aa10.81□□□□□ -0.68
UBE3B-209ENST00000539584 BMPR1BO00238 502 aa10.81□□□□□ -0.68
UBE3B-209ENST00000539584 IGHV3-7P01780 117 aa10.81□□□□□ -0.68
UBE3B-209ENST00000539584 SP9P0CG40 484 aa10.81□□□□□ -0.68
UBE3B-209ENST00000539584 CD33P20138 364 aa10.81□□□□□ -0.68
UBE3B-209ENST00000539584 TNFSF4P23510 183 aa10.81□□□□□ -0.68
UBE3B-209ENST00000539584 VSTM2AQ8TAG5 236 aa10.81□□□□□ -0.68
UBE3B-209ENST00000539584 ITLN1Q8WWA0 313 aa10.81□□□□□ -0.68
UBE3B-209ENST00000539584 BORCS7Q96B45 105 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms