RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 SIGLECL1Q8N7X8 197 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 OR10P1Q8NGE3 313 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 PRDM13Q9H4Q3 707 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 FCN1O00602 326 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 HOXA3O43365 443 aaPredicted RBP12.24□□□□□ -0.45
VAMP1-207ENST00000539047 CST7O76096 145 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 ZNF266Q14584 549 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 MRGPRG-AS1Q2M3A8 158 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 FBLN7Q53RD9 439 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 ARSJQ5FYB0 599 aaPredicted RBP12.24□□□□□ -0.45
VAMP1-207ENST00000539047 C9orf152Q5JTZ5 239 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 OR8G2PQ6IF36 304 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 SLC25A24Q6NUK1 477 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 TMEM14EPQ6UXP3 125 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 TMEM217Q8N7C4 229 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 OR10W1Q8NGF6 305 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 OR1L6Q8NGR2 347 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 OR4C12Q96R67 309 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 PARP11Q9NR21 331 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 TNFRSF19Q9NS68 423 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 FBXL17Q9UF56 701 aa12.24□□□□□ -0.45
VAMP1-207ENST00000539047 CORTO00230 105 aa12.23□□□□□ -0.45
VAMP1-207ENST00000539047 DEFA4P12838 97 aa12.23□□□□□ -0.45
VAMP1-207ENST00000539047 SLC38A11Q08AI6 406 aa12.23□□□□□ -0.45
VAMP1-207ENST00000539047 C2orf83Q53S99 150 aa12.23□□□□□ -0.45
VAMP1-207ENST00000539047 LAMTOR1Q6IAA8 161 aa12.23□□□□□ -0.45
VAMP1-207ENST00000539047 ZNF418Q8TF45 676 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-207ENST00000539047 TMEM68Q96MH6 324 aa12.23□□□□□ -0.45
VAMP1-207ENST00000539047 ZNF48Q96MX3 618 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-207ENST00000539047 ZNF471Q9BX82 626 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-207ENST00000539047 SMIM3Q9BZL3 60 aa12.23□□□□□ -0.45
VAMP1-207ENST00000539047 NPFFR1Q9GZQ6 430 aa12.23□□□□□ -0.45
VAMP1-207ENST00000539047 IGHV7-81A0A0B4J1V7 117 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 IGLC7A0M8Q6 106 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 C15orf62A8K5M9 175 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 TEX22C9J3V5 150 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 IFNA5P01569 189 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 UBA52P62987 128 aaKnown RBP12.22□□□□□ -0.45
VAMP1-207ENST00000539047 NHLH2Q02577 135 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 ATP6V1FQ16864 119 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 ETV3LQ6ZN32 361 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 SLC35E3Q7Z769 313 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 SLC51BQ86UW2 128 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 STPG2Q8N412 459 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 ZNF114Q8NC26 417 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 OR5C1Q8NGR4 320 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 ATP5SQ99766 215 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 SMR3AQ99954 134 aa12.22□□□□□ -0.45
VAMP1-207ENST00000539047 TNCP24821 2201 aa12.21□□□□□ -0.45
VAMP1-207ENST00000539047 RPS10-NUDT3A0A1W2PQS6 291 aa12.21□□□□□ -0.45
VAMP1-207ENST00000539047 CGB1A6NKQ9 187 aa12.21□□□□□ -0.45
VAMP1-207ENST00000539047 JTBO76095 146 aa12.21□□□□□ -0.45
VAMP1-207ENST00000539047 REG1AP05451 166 aa12.21□□□□□ -0.45
VAMP1-207ENST00000539047 RNASE2P10153 161 aaKnown RBP12.21□□□□□ -0.45
VAMP1-207ENST00000539047 TPT1P13693 172 aaKnown RBP12.21□□□□□ -0.45
VAMP1-207ENST00000539047 WT1-ASQ06250 92 aa12.21□□□□□ -0.45
VAMP1-207ENST00000539047 CLINT1Q14677 625 aa12.21□□□□□ -0.45
VAMP1-207ENST00000539047 SGMS2Q8NHU3 365 aa12.21□□□□□ -0.45
VAMP1-207ENST00000539047 RNASEH2CQ8TDP1 164 aaKnown RBP12.21□□□□□ -0.45
VAMP1-207ENST00000539047 JMJD8Q96S16 334 aa12.21□□□□□ -0.45
VAMP1-207ENST00000539047 NPIPB5A8MRT5 1133 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 E7EUB6 86 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 ATP6V0E1O15342 81 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 APELAP0DMC3 54 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 AREGP15514 252 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 SSBP2P81877 361 aaPredicted RBP12.2□□□□□ -0.46
VAMP1-207ENST00000539047 EXOSC2Q13868 293 aaKnown RBP12.2□□□□□ -0.46
VAMP1-207ENST00000539047 ECSCRQ19T08 205 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 BSXQ3C1V8 233 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 ETFRF1Q6IPR1 90 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 UNQ5815/PRO19632Q6UWF5 114 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 OR1P1Q8NH06 330 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 SCGB1C1Q8TD33 95 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 HSPB9Q9BQS6 159 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 FAM103A1Q9BTL3 118 aaKnown RBP12.2□□□□□ -0.46
VAMP1-207ENST00000539047 TMEM147Q9BVK8 224 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 GGACTQ9BVM4 153 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 GON7Q9BXV9 100 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 PRSS22Q9GZN4 317 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 F11RQ9Y624 299 aaKnown RBP12.2□□□□□ -0.46
VAMP1-207ENST00000539047 NAV3Q8IVL0 2385 aa12.2□□□□□ -0.46
VAMP1-207ENST00000539047 A0A1B0GW64 132 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 SMCO3A2RU48 225 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 AP4M1O00189 453 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 OPRK1P41145 380 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 DLK1P80370 383 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 NDPQ00604 133 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 TUSC1Q2TAM9 212 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 EIF5AL1Q6IS14 154 aaKnown RBP12.19□□□□□ -0.46
VAMP1-207ENST00000539047 SLC35E1Q96K37 410 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 P2RX4Q99571 388 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 GSX1Q9H4S2 264 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-207ENST00000539047 SLA2Q9H6Q3 261 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 UQCC1Q9NVA1 299 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 THYN1Q9P016 225 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 CSPG4Q6UVK1 2322 aa12.19□□□□□ -0.46
VAMP1-207ENST00000539047 UBE2L5PA0A1B0GUS4 154 aa12.18□□□□□ -0.46
VAMP1-207ENST00000539047 DNAJC9-AS1A6NH13 148 aa12.18□□□□□ -0.46
VAMP1-207ENST00000539047 TRIM77I1YAP6 450 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms