RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TMEM167AQ8TBQ9 72 aa11.34□□□□□ -0.59
ACTN1-205ENST00000538545 TNFRSF14Q92956 283 aa11.34□□□□□ -0.59
ACTN1-205ENST00000538545 MRPL36Q9P0J6 103 aaKnown RBP11.34□□□□□ -0.59
ACTN1-205ENST00000538545 IGHV3OR16-10A0A075B7F0 116 aa11.33□□□□□ -0.6
ACTN1-205ENST00000538545 A0A1W2PPH5 198 aa11.33□□□□□ -0.6
ACTN1-205ENST00000538545 SNRNP70P08621 437 aaKnown RBP11.33□□□□□ -0.6
ACTN1-205ENST00000538545 KIAA0141Q14154 515 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-205ENST00000538545 SPATA31B1PQ5VZV4 182 aa11.33□□□□□ -0.6
ACTN1-205ENST00000538545 FAM103A1Q9BTL3 118 aaKnown RBP11.33□□□□□ -0.6
ACTN1-205ENST00000538545 METTL1Q9UBP6 276 aaKnown RBP11.33□□□□□ -0.6
ACTN1-205ENST00000538545 LY6LH3BQJ8 138 aa11.33□□□□□ -0.6
ACTN1-205ENST00000538545 FSTL3O95633 263 aa11.33□□□□□ -0.6
ACTN1-205ENST00000538545 USF1P22415 310 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-205ENST00000538545 RPP30P78346 268 aaKnown RBP11.33□□□□□ -0.6
ACTN1-205ENST00000538545 BEND2Q8NDZ0 799 aa11.33□□□□□ -0.6
ACTN1-205ENST00000538545 OR1L8Q8NGR8 309 aa11.33□□□□□ -0.6
ACTN1-205ENST00000538545 PBDC1Q9BVG4 233 aa11.33□□□□□ -0.6
ACTN1-205ENST00000538545 ZNF257Q9Y2Q1 563 aa11.33□□□□□ -0.6
ACTN1-205ENST00000538545 ZNF469Q96JG9 3925 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-205ENST00000538545 M0R036 132 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 OVOL3O00110 214 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 ACTL6BO94805 426 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 HTR1DP28221 377 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 PSG5Q15238 335 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 OR5B3Q8NH48 314 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 ACY3Q96HD9 319 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 SLC35B3Q9H1N7 401 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 FNDC4Q9H6D8 234 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-205ENST00000538545 PXMP4Q9Y6I8 212 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 hCG_1809904A0A1W2PP81 198 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 A0A1W2PPE2 198 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 A0A1W2PR64 198 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 A0A1W2PRV1 198 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 SRP19P09132 144 aaKnown RBP11.32□□□□□ -0.6
ACTN1-205ENST00000538545 MC5RP33032 325 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 LMO4P61968 165 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 HES1Q14469 280 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 VMA21Q3ZAQ7 101 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 CENPVQ7Z7K6 275 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-205ENST00000538545 CLRN3Q8NCR9 226 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 CCL19Q99731 98 aa11.32□□□□□ -0.6
ACTN1-205ENST00000538545 PARD6GQ9BYG4 376 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-205ENST00000538545 UBE2G2P60604 165 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 GAMTQ14353 236 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 AWAT1Q58HT5 328 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 FAM71F2Q6NXP2 309 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 LFNGQ8NES3 379 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 ISOC2Q96AB3 205 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 PERPQ96FX8 193 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 NPVFQ9HCQ7 196 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 SIGLEC9Q9Y336 463 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 PLGLAQ15195 96 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 MMDQ15546 238 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 TPTE2P1Q5T6R2 138 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 COMMD1Q8N668 190 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 MBD3L1Q8WWY6 194 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 P2RX4Q99571 388 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 SEPSECSQ9HD40 501 aaKnown RBP11.31□□□□□ -0.6
ACTN1-205ENST00000538545 LSM4Q9Y4Z0 139 aaKnown RBP11.31□□□□□ -0.6
ACTN1-205ENST00000538545 TIMM9Q9Y5J7 89 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 VENTXO95231 258 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 SNRPCP09234 159 aaKnown RBP11.31□□□□□ -0.6
ACTN1-205ENST00000538545 PRTN3P24158 256 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 MFAP2P55001 183 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 B2MP61769 119 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 SOHLH1Q5JUK2 328 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 STPG3Q8N7X2 389 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 RPS10P5Q9NQ39 176 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 DPM3Q9P2X0 92 aa11.31□□□□□ -0.6
ACTN1-205ENST00000538545 TLN2Q9Y4G6 2542 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 NAV2Q8IVL1 2488 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 IGHV4-61A0A0C4DH41 118 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 LOC102723971A0A1B0GUV8 181 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 HOXB4P17483 251 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-205ENST00000538545 DLK1P80370 383 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 PRSS8Q16651 343 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 TEPPQ6URK8 271 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 VSTM2AQ8TAG5 236 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 ABHD5Q8WTS1 349 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 GSX1Q9H4S2 264 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-205ENST00000538545 FKBP11Q9NYL4 201 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 C17orf112F2Z3M2 114 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 FOXH1O75593 365 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 SNAPINO95295 136 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 BCL2P10415 239 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 OPRK1P41145 380 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 CDC34P49427 236 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-205ENST00000538545 PPP1R27Q86WC6 154 aa11.3□□□□□ -0.6
ACTN1-205ENST00000538545 HBE1P02100 147 aa11.29□□□□□ -0.6
ACTN1-205ENST00000538545 OR10J1P30954 320 aa11.29□□□□□ -0.6
ACTN1-205ENST00000538545 ERHP84090 104 aaKnown RBP11.29□□□□□ -0.6
ACTN1-205ENST00000538545 PAX2Q02962 417 aa11.29□□□□□ -0.6
ACTN1-205ENST00000538545 ZNF506Q5JVG8 444 aa11.29□□□□□ -0.6
ACTN1-205ENST00000538545 DPPA3Q6W0C5 159 aa11.29□□□□□ -0.6
ACTN1-205ENST00000538545 OR11H6Q8NGC7 330 aa11.29□□□□□ -0.6
ACTN1-205ENST00000538545 KPTNQ9Y664 436 aa11.29□□□□□ -0.6
ACTN1-205ENST00000538545 CTXND1A0A1B0GTU2 59 aa11.29□□□□□ -0.6
ACTN1-205ENST00000538545 IGLC7A0M8Q6 106 aa11.29□□□□□ -0.6
ACTN1-205ENST00000538545 ATF4P18848 351 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-205ENST00000538545 BSXQ3C1V8 233 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms