RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 CA7P43166 264 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 HSD52Q0P140 79 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 SRSF6Q13247 344 aaKnown RBP5.52□□□□□ -1.53
USP28-207ENST00000538475 SCGB2A2Q13296 93 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 EFNB3Q15768 340 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 CT45A1Q5HYN5 189 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 MUC21Q5SSG8 566 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 LINC01545Q5VT33 79 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 Q6P435 159 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 SLC22A18ASQ8N1D0 253 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 STPG3Q8N7X2 389 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 C5orf17Q8NAS9 161 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 OR1K1Q8NGR3 316 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 OR2K2Q8NGT1 345 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 OR10AG1Q8NH19 301 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 OR4A16Q8NH70 328 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 CT45A3Q8NHU0 189 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 VSTM2AQ8TAG5 236 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 LMX1AQ8TE12 382 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 THAP3Q8WTV1 239 aaPredicted RBP5.52□□□□□ -1.53
USP28-207ENST00000538475 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.52□□□□□ -1.53
USP28-207ENST00000538475 H1FXQ92522 213 aaKnown RBP5.52□□□□□ -1.53
USP28-207ENST00000538475 C5orf30Q96GV9 206 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 ATP6V0BQ99437 205 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 FOXB1Q99853 325 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 LINC00470Q9BZP3 86 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 GFRA4Q9GZZ7 299 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 OCIAD1Q9NX40 245 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 SIGLEC8Q9NYZ4 499 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 KCNS2Q9ULS6 477 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 MMP17Q9ULZ9 603 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 PPP1R3CQ9UQK1 317 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 RNF24Q9Y225 148 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 POLDIP2Q9Y2S7 368 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 YTHDF2Q9Y5A9 579 aaKnown RBP5.52□□□□□ -1.53
USP28-207ENST00000538475 CABIN1Q9Y6J0 2220 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 PCNTO95613 3336 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 TRAV8-6A0A0B4J262 113 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 TRAV38-1A0A0B4J264 116 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 A0A1B0GW15 77 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 A0A1B0GXF2 115 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 PGPEP1LA6NFU8 196 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 OOEPA6NGQ2 149 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 PRSS47A8MTI9 375 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 LAMTOR5O43504 91 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 FTH1P19P0C7X4 201 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 EGR1P18146 543 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 HTR1DP28221 377 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 SSTR5P35346 364 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 EDDM3BP56851 147 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 IZUMO4Q1ZYL8 232 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 CD300EQ496F6 205 aaPredicted RBP5.51□□□□□ -1.53
USP28-207ENST00000538475 DMRTC1Q5HYR2 192 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 SLC35E4Q6ICL7 350 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 MRPL21Q7Z2W9 205 aaKnown RBP5.51□□□□□ -1.53
USP28-207ENST00000538475 FAM19A2Q8N3H0 131 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 OR2Z1Q8NG97 314 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 OR1L3Q8NH93 324 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 PIFOQ8TCI5 191 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 IGF2BP2-AS1Q96M15 143 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 MGST2Q99735 147 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 NPFFR1Q9GZQ6 430 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 SPANXA1Q9NS26 97 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 RABAC1Q9UI14 185 aa5.51□□□□□ -1.53
USP28-207ENST00000538475 GON4LQ3T8J9 2241 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 ASCC3Q8N3C0 2202 aaKnown RBP5.5□□□□□ -1.53
USP28-207ENST00000538475 A0A0G2JMM0 328 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 A0A1W2PPB8 328 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 TMEM30CPA0ZSE6 113 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 FAM90A27PA6NNH2 459 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 ANKRD30BLA7E2S9 258 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 KIR3DP1A8MWS1 328 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 IGLV2-8P01709 118 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 CT45A10P0DMU9 189 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 CCNOP22674 350 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 DUTP33316 252 aaKnown RBP5.5□□□□□ -1.53
USP28-207ENST00000538475 VDAC2P45880 294 aaPredicted RBP5.5□□□□□ -1.53
USP28-207ENST00000538475 PLP1P60201 277 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 ARF1P84077 181 aaKnown RBP5.5□□□□□ -1.53
USP28-207ENST00000538475 TLE1Q04724 770 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 SLAQ13239 276 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 ZNF146Q15072 292 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 PDCD1Q15116 288 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 LCN12Q6JVE5 192 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 RNASEKQ6P5S7 137 aaKnown RBP5.5□□□□□ -1.53
USP28-207ENST00000538475 FOXI2Q6ZQN5 318 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 Q6ZS92 163 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 Q6ZVH6 145 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 AAED1Q7RTV5 226 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 TMEM251Q8N6I4 163 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 OR2T6Q8NHC8 308 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 NEUROG1Q92886 237 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 GALMQ96C23 342 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 POM121L2Q96KW2 1035 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 ZNF48Q96MX3 618 aaPredicted RBP5.5□□□□□ -1.53
USP28-207ENST00000538475 GPHA2Q96T91 129 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 IL23AQ9NPF7 189 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 IDI2-AS1Q9NZ38 188 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 ZNF492Q9P255 531 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms