RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 OR1P1Q8NH06 330 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 MRPL13Q9BYD1 178 aaKnown RBP9.38□□□□□ -0.91
LINC00346-201ENST00000538077 Q9H3A6 140 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 MPTX1A8MV57 137 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 SOD3P08294 240 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 TMEM167AQ8TBQ9 72 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 C2orf88Q9BSF0 95 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 LRRC37A2A6NM11 1700 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 TRAV8-6A0A0B4J262 113 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 PPIFP30405 207 aaKnown RBP9.38□□□□□ -0.91
LINC00346-201ENST00000538077 PRR31Q5SQ13 230 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 ALX4Q9H161 411 aaPredicted RBP9.38□□□□□ -0.91
LINC00346-201ENST00000538077 LINC00312Q9Y6C7 94 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 LOC390937A0A1W2PQ73 354 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 TCF24Q7RTU0 167 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 AQP10Q96PS8 301 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 NBEAP1P0C6P0 100 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 CBLN1P23435 193 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 ATP5G3P48201 142 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 CFAP161Q6P656 301 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 PGPEP1Q9NXJ5 209 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 CACNA1CQ13936 2221 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 OR10AG1Q8NH19 301 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 OR52E5Q8NH55 327 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 IMMP2LQ96T52 175 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 CHD5Q8TDI0 1954 aa9.37□□□□□ -0.91
LINC00346-201ENST00000538077 NPIPB9F8W1W9 429 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 NPIPB7O75200 414 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 RHOGP84095 191 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 PQLC2LA1A4F0 135 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 TIMM23O14925 209 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 SCN5AQ14524 2016 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 IGLV3-19P01714 112 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 HLA-DQA1P01909 254 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 HBBP68871 147 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 REC114Q7Z4M0 266 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 OSR1Q8TAX0 266 aaPredicted RBP9.36□□□□□ -0.91
LINC00346-201ENST00000538077 NUP214P35658 2090 aaPredicted RBP9.36□□□□□ -0.91
LINC00346-201ENST00000538077 LINC00862A6NCI5 91 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 NPIPB4C9JG80 1138 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 MLNRO43193 412 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 CSRP1P21291 193 aaKnown RBP9.36□□□□□ -0.91
LINC00346-201ENST00000538077 FAM209BQ5JX69 171 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 Q5PR19 223 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 CYB5R2Q6BCY4 276 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 ST6GALNAC6Q969X2 333 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 PRELID3AQ96N28 172 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 RPRMQ9NS64 109 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 TRAV14DV4A0A0A6YYC5 116 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 IGHV1-46P01743 117 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 ERVK11-1P61568 191 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 TMEM42Q69YG0 159 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 BEND2Q8NDZ0 799 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 SCGB3A1Q96QR1 104 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 JMJD8Q96S16 334 aa9.36□□□□□ -0.91
LINC00346-201ENST00000538077 TMEM30BQ3MIR4 351 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 ZNF385CQ66K41 422 aaPredicted RBP9.35□□□□□ -0.91
LINC00346-201ENST00000538077 TMEM133Q9H2Q1 129 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 CFHR1Q03591 330 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 APOHP02749 345 aaPredicted RBP9.35□□□□□ -0.91
LINC00346-201ENST00000538077 TMEM136Q6ZRR5 245 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 LCTP09848 1927 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 TRGV4A0A0C4DH28 118 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 K7ERU9 68 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 LY6HO94772 140 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 FABP2P12104 132 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 SAPCD1Q5SSQ6 148 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 COL5A1-AS1Q5SY13 56 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 ZNF98A6NK75 572 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 E9PLN8 166 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 EVI2AP22794 236 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 LEPP41159 167 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 FOXG1P55316 489 aaPredicted RBP9.35□□□□□ -0.91
LINC00346-201ENST00000538077 VGLL1Q99990 258 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 VKORC1Q9BQB6 163 aa9.35□□□□□ -0.91
LINC00346-201ENST00000538077 RTBDNQ9BSG5 229 aaPredicted RBP9.35□□□□□ -0.91
LINC00346-201ENST00000538077 COL4A6Q14031 1691 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 A0A0G2JNJ9 132 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 CXorf65A6NEN9 183 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 FOLR2P14207 255 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 PSMG4Q5JS54 123 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 Q9UFV3 132 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 CD55P08174 381 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 ZFP36L1Q07352 338 aaKnown RBP9.34□□□□□ -0.91
LINC00346-201ENST00000538077 Q0VFX4 171 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 OR10J3Q5JRS4 329 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 OR11H4Q8NGC9 324 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 RNASEH2CQ8TDP1 164 aaKnown RBP9.34□□□□□ -0.91
LINC00346-201ENST00000538077 FMC1Q96HJ9 113 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 JKAMPQ9P055 326 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 IGHV3-64A0A075B6Q5 118 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 GAGE10A6NGK3 116 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 OR10W1Q8NGF6 305 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 NYNRINQ9P2P1 1898 aaKnown RBP9.34□□□□□ -0.91
LINC00346-201ENST00000538077 SIP14410 1827 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 DANCRP0C864 163 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 MEF2CQ06413 473 aaPredicted RBP9.34□□□□□ -0.91
LINC00346-201ENST00000538077 PUSL1Q8N0Z8 303 aaKnown RBP9.34□□□□□ -0.91
LINC00346-201ENST00000538077 ST6GALNAC3Q8NDV1 305 aa9.34□□□□□ -0.91
LINC00346-201ENST00000538077 A0A1B0GV72 72 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms