RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 GNG4P50150 75 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 TCL1AP56279 114 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 RPS16P62249 146 aaKnown RBP9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 SEC11AP67812 179 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 ABHD17BQ5VST6 288 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 WIPF2Q8TF74 440 aaPredicted RBP9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 ZC2HC1AQ96GY0 325 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 GP6Q9HCN6 339 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 ZNF331Q9NQX6 463 aaPredicted RBP9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 PSG11Q9UQ72 335 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 CACNA1GO43497 2377 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 PPIAL4EA0A075B759 164 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 PPIAL4CA0A0B4J2A2 164 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 hDV102S1A0JD36 115 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 IZUMO1RA6ND01 250 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 PPIAL4DF5H284 164 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 MPDU1O75352 247 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 NEURL1O76050 574 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 RFPL3SP0C7P2 107 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 PPIAL4FP0DN26 164 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 SPSB4Q96A44 273 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 HS3ST6Q96QI5 342 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 ATP6V0BQ99437 205 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 RNASE7Q9H1E1 156 aaKnown RBP9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 FNDC4Q9H6D8 234 aaPredicted RBP9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 SAP30LQ9HAJ7 183 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 OR1A1Q9P1Q5 309 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 ATMQ13315 3056 aa9.41□□□□□ -0.9
SEMA4D-221ENST00000537934 TRAPPC2LH3BP13 241 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 K7EP34 96 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 ISLRO14498 428 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 ZIC3O60481 467 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 P0C879 139 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 AREGP15514 252 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 AZU1P20160 251 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 GCHFRP30047 84 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 GPR183P32249 361 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 CENPWQ5EE01 88 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 RNASEKQ6P5S7 137 aaKnown RBP9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 FER1L6-AS2Q96M78 137 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 ZNF835Q9Y2P0 537 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 A0A087X0K7 114 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 C9orf118A6NHY6 69 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 CLDN14O95500 239 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 SPINK2P20155 84 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 CEACAM3P40198 252 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 FXYD3Q14802 87 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 KRTAP27-1Q3LI81 207 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 IL1F10Q8WWZ1 152 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 SIGMAR1Q99720 223 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 MS4A6AQ9H2W1 248 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 DSPP15924 2871 aaKnown RBP9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 ACACAQ13085 2346 aa9.4□□□□□ -0.9
SEMA4D-221ENST00000537934 ANKRD11Q6UB99 2663 aaPredicted RBP9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 HELTA6NFD8 242 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 SYS1-DBNDD2H3BUS1 97 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 GFRA3O60609 400 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 DSCR4P56555 118 aaPredicted RBP9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 GABRA6Q16445 453 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 ZNF841Q6ZN19 808 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 YRDCQ86U90 279 aaKnown RBP9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 DOLPP1Q86YN1 238 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 OR2T6Q8NHC8 308 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 ZDHHC16Q969W1 377 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 AP1S3Q96PC3 154 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 CLEC5AQ9NY25 188 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 IL36RNQ9UBH0 155 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 KCNS2Q9ULS6 477 aa9.4□□□□□ -0.91
SEMA4D-221ENST00000537934 A6NJY4 79 aa9.39□□□□□ -0.91
SEMA4D-221ENST00000537934 OR1C1Q15619 314 aa9.39□□□□□ -0.91
SEMA4D-221ENST00000537934 TMEM191AQ9H0A3 160 aa9.39□□□□□ -0.91
SEMA4D-221ENST00000537934 ZNF407Q9C0G0 2248 aa9.39□□□□□ -0.91
SEMA4D-221ENST00000537934 H3BRM9 83 aa9.39□□□□□ -0.91
SEMA4D-221ENST00000537934 G6PCP35575 357 aa9.39□□□□□ -0.91
SEMA4D-221ENST00000537934 FAM120AOSQ5T036 256 aa9.39□□□□□ -0.91
SEMA4D-221ENST00000537934 FAM162BQ5T6X4 162 aa9.39□□□□□ -0.91
SEMA4D-221ENST00000537934 SLC35E4Q6ICL7 350 aa9.39□□□□□ -0.91
SEMA4D-221ENST00000537934 PQLC2Q6ZP29 291 aa9.39□□□□□ -0.91
SEMA4D-221ENST00000537934 OR10W1Q8NGF6 305 aa9.39□□□□□ -0.91
SEMA4D-221ENST00000537934 DNAJC13O75165 2243 aa9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 TIGITQ495A1 244 aa9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 PDLIM3Q53GG5 364 aaPredicted RBP9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 SPATA46Q5T0L3 261 aa9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 DRAM1Q8N682 238 aa9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 PMCHL2Q9BQD1 86 aa9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 NPFFR1Q9GZQ6 430 aa9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 CLCF1Q9UBD9 225 aa9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 C15orf62A8K5M9 175 aa9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 FKBP2P26885 142 aaKnown RBP9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 PLP1P60201 277 aa9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 IBA57Q5T440 356 aaKnown RBP9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
SEMA4D-221ENST00000537934 OR2J3O76001 311 aa9.37□□□□□ -0.91
SEMA4D-221ENST00000537934 HTR1DP28221 377 aa9.37□□□□□ -0.91
SEMA4D-221ENST00000537934 RPL8P62917 257 aaKnown RBP9.37□□□□□ -0.91
SEMA4D-221ENST00000537934 TMEM97Q5BJF2 176 aa9.37□□□□□ -0.91
SEMA4D-221ENST00000537934 WDR82Q6UXN9 313 aa9.37□□□□□ -0.91
SEMA4D-221ENST00000537934 LINC00596Q86U02 117 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms