RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, human

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD1-215	ENST00000537824	IGKV3D-11	A0A0A0MRZ8	115 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	FAM90A26	D6RGX4	464 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	IGKV3-11	P04433	115 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	TMPRSS3	P57727	454 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	UNC119	Q13432	240 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	GATAD1	Q8WUU5	269 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	ZNF764	Q96H86	408 aa	Predicted RBP	4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	C16orf92	Q96LL3	132 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	MPV17L2	Q567V2	206 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	PSMG4	Q5JS54	123 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	OR4A5	Q8NH83	315 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824		A0A1B0GUS0	222 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	TDGF1	P13385	188 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	CCL11	P51671	97 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	SRSF6	Q13247	344 aa	Known RBP	4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	SEPSECS	Q9HD40	501 aa	Known RBP	4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	ATP5G3	P48201	142 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	FOXL2	P58012	376 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	ANKRD17	O75179	2603 aa	Known RBP	4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	SHISA3	A0PJX4	238 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	WISP3	O95389	354 aa	Predicted RBP	4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	CD33	P20138	364 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	IFI27L1	Q96BM0	104 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	LRRC61	Q9BV99	259 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	ITGB1BP1	O14713	200 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	ZIC3	O60481	467 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	PGLYRP1	O75594	196 aa	Predicted RBP	4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	CDKN1B	P46527	198 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	ERVK11-1	P61568	191 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	ECSCR	Q19T08	205 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	DNM1P46	Q6ZS02	220 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	ORMDL3	Q8N138	153 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	NPIPB3	Q92617	1050 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	CDCA3	Q99618	268 aa	Predicted RBP	4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	PSG9	Q00887	426 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	LSM4	Q9Y4Z0	139 aa	Known RBP	4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	TMEM56-RWDD3	S4R434	201 aa		4.84	□□□□□ -1.63
CSMD1-215	ENST00000537824	CENPVL1	A0A0U1RR11	272 aa		4.84	□□□□□ -1.64
CSMD1-215	ENST00000537824	TNFAIP6	P98066	277 aa	Predicted RBP	4.84	□□□□□ -1.64
CSMD1-215	ENST00000537824	ACTL10	Q5JWF8	245 aa		4.84	□□□□□ -1.64
CSMD1-215	ENST00000537824	LINC00615	Q96LM1	132 aa	Predicted RBP	4.84	□□□□□ -1.64
CSMD1-215	ENST00000537824	FAM117A	Q9C073	453 aa		4.84	□□□□□ -1.64
CSMD1-215	ENST00000537824	RABAC1	Q9UI14	185 aa		4.84	□□□□□ -1.64
CSMD1-215	ENST00000537824	MS4A6A	Q9H2W1	248 aa		4.84	□□□□□ -1.64
CSMD1-215	ENST00000537824	PAPPA	Q13219	1627 aa		4.84	□□□□□ -1.64
CSMD1-215	ENST00000537824		Q6ZNB5	142 aa		4.84	□□□□□ -1.64
CSMD1-215	ENST00000537824	METTL26	Q96S19	204 aa		4.84	□□□□□ -1.64
CSMD1-215	ENST00000537824	SFXN3	Q9BWM7	321 aa		4.84	□□□□□ -1.64
CSMD1-215	ENST00000537824		H0YIZ8	118 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	TSPAN7	P41732	249 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	TMEM78	Q5T7P6	136 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	TPRX1	Q8N7U7	411 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	LINC01555	Q8NAE3	123 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	MARS2	Q96GW9	593 aa	Known RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	FER1L6-AS2	Q96M78	137 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	EPG5	Q9HCE0	2579 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	FAM231B	A6NCW3	169 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	CDIPT	O14735	213 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	ZNF56	Q15929	161 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	VN1R4	Q7Z5H5	301 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	UCN2	Q96RP3	112 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	MBNL3	Q9NUK0	354 aa	Known RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	KLF12	Q9Y4X4	402 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	MPC1	Q9Y5U8	109 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	PSMB11	A5LHX3	300 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	UPK3A	O75631	287 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	CGA	P01215	116 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	TNFRSF1A	P19438	455 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824		Q96M66	194 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	JMJD8	Q96S16	334 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	SYNGR3	O43761	229 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	FOXL1	Q12952	345 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	WIPI1	Q5MNZ9	446 aa	Predicted RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	TMEM101	Q96IK0	257 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	WFDC6	Q9BQY6	131 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824		A0A1B0GW64	132 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	GREM1	O60565	184 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	EVI2A	P22794	236 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	ZNF714	Q96N38	554 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	C20orf144	Q9BQM9	153 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	PPIH	O43447	177 aa	Known RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	SELL	P14151	372 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	ZIC1	Q15915	447 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	KLF13	Q9Y2Y9	288 aa	Predicted RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	PRRT4	C9JH25	899 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	SUMO2	P61956	95 aa	Known RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	C3AR1	Q16581	482 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	ASPHD2	Q6ICH7	369 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	IL6R	P08887	468 aa	Predicted RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	RPL8	P62917	257 aa	Known RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	BCL6B	Q8N143	479 aa	Predicted RBP	4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	FGFRL1	Q8N441	504 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	LINC01465	Q8N7H1	131 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	KIR2DL4	Q99706	377 aa		4.83	□□□□□ -1.64
CSMD1-215	ENST00000537824	TCF19	Q9Y242	345 aa		4.83	□□□□□ -1.64

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