RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 IGKV1-8A0A0C4DH67 115 aa9.03□□□□□ -0.96
CLIP1-209ENST00000537178 SLC25A20O43772 301 aa9.03□□□□□ -0.96
CLIP1-209ENST00000537178 GLRXP35754 106 aa9.03□□□□□ -0.96
CLIP1-209ENST00000537178 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-209ENST00000537178 PRDM13Q9H4Q3 707 aa9.03□□□□□ -0.96
CLIP1-209ENST00000537178 TRAV9-1A0A075B6T8 112 aa9.02□□□□□ -0.96
CLIP1-209ENST00000537178 KLF4O43474 513 aa9.02□□□□□ -0.96
CLIP1-209ENST00000537178 APOMO95445 188 aa9.02□□□□□ -0.96
CLIP1-209ENST00000537178 GPR183P32249 361 aa9.02□□□□□ -0.96
CLIP1-209ENST00000537178 FHITP49789 147 aa9.02□□□□□ -0.96
CLIP1-209ENST00000537178 ACSF3Q4G176 576 aaPredicted RBP9.02□□□□□ -0.96
CLIP1-209ENST00000537178 WDYHV1Q96HA8 205 aa9.02□□□□□ -0.96
CLIP1-209ENST00000537178 GP6Q9HCN6 339 aa9.02□□□□□ -0.96
CLIP1-209ENST00000537178 SPCS1Q9Y6A9 102 aa9.02□□□□□ -0.96
CLIP1-209ENST00000537178 PLXNA2O75051 1894 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-209ENST00000537178 PEX7O00628 323 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 CD8AP01732 235 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 C21orf62Q9NYP8 219 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 TBL2Q9Y4P3 447 aaKnown RBP9.02□□□□□ -0.97
CLIP1-209ENST00000537178 STARD6P59095 220 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 DUX3Q96PT4 197 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 DMRTA2Q96SC8 542 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 NPCDR1Q9BY65 106 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 GSN-AS1Q9NRJ2 163 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 ELOVL5Q9NYP7 299 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 A0A0C4DFX4 3053 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 FUT5Q11128 374 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 ORMDL3Q8N138 153 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 C14orf144Q96I85 54 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 SPAG8Q99932 426 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-209ENST00000537178 FBXL7Q9UJT9 491 aa9.02□□□□□ -0.97
CLIP1-209ENST00000537178 KIAA1549LQ6ZVL6 1849 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 DOCK6Q96HP0 2047 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 PQLC2LA1A4F0 135 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 ZNHIT1O43257 154 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 OR5P3Q8WZ94 311 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 WNT10AQ9GZT5 417 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 TMEM50AO95807 157 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 CD69Q07108 199 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 TMEM95Q3KNT9 176 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 OR5AN1Q8NGI8 311 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 CACNG8Q8WXS5 425 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 NPFFR1Q9GZQ6 430 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 TM4SF5O14894 197 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 TDGF1P13385 188 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 PAX1P15863 534 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 APOBEC3AP31941 199 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-209ENST00000537178 SCARF2Q96GP6 870 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-209ENST00000537178 TMEM106BQ9NUM4 274 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 XIRP2A4UGR9 3374 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 UNC80Q8N2C7 3258 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 Q6ZT83 130 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 OR52E5Q8NH55 327 aa9.01□□□□□ -0.97
CLIP1-209ENST00000537178 ITLN2Q8WWU7 325 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-209ENST00000537178 RPP21Q9H633 154 aaKnown RBP9.01□□□□□ -0.97
CLIP1-209ENST00000537178 FER1L6-AS1Q8NA97 138 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 C5orf30Q96GV9 206 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 FMC1Q96HJ9 113 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 PLXND1Q9Y4D7 1925 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 CACNA1IQ9P0X4 2223 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 CGAP01215 116 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 TIMM23BQ5SRD1 257 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 LINC01590Q5TEZ4 76 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 FBXL15Q9H469 300 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 CDCP2Q5VXM1 449 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 ZNRF1Q8ND25 227 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 TRGV2A0A075B6R0 118 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 IGHV3-49A0A0A0MS15 119 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 IGHMP01871 453 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 UCP1P25874 307 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 RPL39P5Q59GN2 51 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 SLC22A18ASQ8N1D0 253 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 ST6GALNAC3Q8NDV1 305 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 OR4X2Q8NGF9 303 aa9□□□□□ -0.97
CLIP1-209ENST00000537178 C12orf77C9JDV5 145 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 ATRAIDQ6UW56 229 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 SDF2L1Q9HCN8 221 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 CARHSP1Q9Y2V2 147 aaKnown RBP8.99□□□□□ -0.97
CLIP1-209ENST00000537178 SPTBN2O15020 2390 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 LDLRAD4O15165 306 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 COX6A1P12074 109 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 ASPHD2Q6ICH7 369 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 SLC25A45Q8N413 288 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 SP7Q8TDD2 431 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-209ENST00000537178 SRXN1Q9BYN0 137 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 FOXA2Q9Y261 457 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-209ENST00000537178 SLC17A3O00476 420 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 EFEMP2O95967 443 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 SPTBP11277 2137 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 RTN4RL2Q86UN3 420 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 PPP1R27Q86WC6 154 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 RNASEH2CQ8TDP1 164 aaKnown RBP8.99□□□□□ -0.97
CLIP1-209ENST00000537178 CCL19Q99731 98 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 THSD7BQ9C0I4 1608 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 MDC1Q14676 2089 aaKnown RBP8.99□□□□□ -0.97
CLIP1-209ENST00000537178 CA1P00915 261 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-209ENST00000537178 TGIF1Q15583 401 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 FHL5Q5TD97 284 aa8.99□□□□□ -0.97
CLIP1-209ENST00000537178 OR5A1Q8NGJ0 315 aa8.99□□□□□ -0.97
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