RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 CCDC140Q96MF4 163 aa6.33□□□□□ -1.4
DDB1-208ENST00000537120 CMTM3Q96MX0 182 aa6.33□□□□□ -1.4
DDB1-208ENST00000537120 C20orf24Q9BUV8 137 aa6.33□□□□□ -1.4
DDB1-208ENST00000537120 PRNDQ9UKY0 176 aa6.33□□□□□ -1.4
DDB1-208ENST00000537120 NSG2Q9Y328 171 aa6.33□□□□□ -1.4
DDB1-208ENST00000537120 HUWE1Q7Z6Z7 4374 aaKnown RBP6.32□□□□□ -1.4
DDB1-208ENST00000537120 IGHV3-21A0A0B4J1V1 117 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 IGLC7A0M8Q6 106 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 CGB1A6NKQ9 187 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 MARCH11A6NNE9 402 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 HPGDSO60760 199 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 APOA1P02647 267 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 EIF4EP06730 217 aaKnown RBP6.32□□□□□ -1.4
DDB1-208ENST00000537120 PGAM2P15259 253 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 EDN2P20800 178 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 NCS1P62166 190 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 ODF1Q14990 250 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 RNASE12Q5GAN4 147 aaKnown RBP6.32□□□□□ -1.4
DDB1-208ENST00000537120 LAMTOR1Q6IAA8 161 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 H2BFWTQ7Z2G1 175 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 LYSMD2Q8IV50 215 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 GDPD1Q8N9F7 314 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 OR1L6Q8NGR2 347 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 ZNF502Q8TBZ5 544 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 LSM10Q969L4 123 aaKnown RBP6.32□□□□□ -1.4
DDB1-208ENST00000537120 TSC22D3Q99576 134 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 FAM110AQ9BQ89 295 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 THAP7Q9BT49 309 aaPredicted RBP6.32□□□□□ -1.4
DDB1-208ENST00000537120 FUNDC2Q9BWH2 189 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 SCPEP1Q9HB40 452 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 MRPL27Q9P0M9 148 aaKnown RBP6.32□□□□□ -1.4
DDB1-208ENST00000537120 MLXQ9UH92 298 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 DMRT1Q9Y5R6 373 aa6.32□□□□□ -1.4
DDB1-208ENST00000537120 TRAV25A0A0B4J276 109 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 TMEM213A2RRL7 107 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 RBMY1BA6NDE4 496 aaKnown RBP6.31□□□□□ -1.4
DDB1-208ENST00000537120 RBMY1EA6NEQ0 496 aaKnown RBP6.31□□□□□ -1.4
DDB1-208ENST00000537120 OR2T8A6NH00 312 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 TGOLN2O43493 480 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 YIF1AO95070 293 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 RBMY1DP0C7P1 496 aaKnown RBP6.31□□□□□ -1.4
DDB1-208ENST00000537120 ELK1P19419 428 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 RCVRNP35243 200 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 SMCPP49901 116 aaPredicted RBP6.31□□□□□ -1.4
DDB1-208ENST00000537120 ELLP55199 621 aaPredicted RBP6.31□□□□□ -1.4
DDB1-208ENST00000537120 ERHP84090 104 aaKnown RBP6.31□□□□□ -1.4
DDB1-208ENST00000537120 SPSB3Q6PJ21 355 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 BTNL8Q6UX41 500 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 UNQ9165/PRO28630Q6UXU0 137 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 TBC1D26Q86UD7 250 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 TMEM61Q8N0U2 210 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 OR2C3Q8N628 320 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 GPX8Q8TED1 209 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 AP3S1Q92572 193 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 TRIM63Q969Q1 353 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 MISP3Q96FF7 219 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 WFDC10AQ9H1F0 79 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 HIPK2Q9H2X6 1198 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 EDA2RQ9HAV5 297 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 RETNQ9HD89 108 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 NDUFA4L2Q9NRX3 87 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 GAR1Q9NY12 217 aaKnown RBP6.31□□□□□ -1.4
DDB1-208ENST00000537120 C21orf62Q9NYP8 219 aa6.31□□□□□ -1.4
DDB1-208ENST00000537120 F11RQ9Y624 299 aaKnown RBP6.31□□□□□ -1.4
DDB1-208ENST00000537120 DNAH7Q8WXX0 4024 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 LOC102724200A0A096LPH7 203 aaPredicted RBP6.3□□□□□ -1.4
DDB1-208ENST00000537120 A8MWP6 167 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 M0QYG6 137 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 ZNF207O43670 478 aaKnown RBP6.3□□□□□ -1.4
DDB1-208ENST00000537120 ATG12O94817 140 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 FGF2P09038 288 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 MFAP4P55083 255 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 WT1-ASQ06250 92 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 KLK9Q2XQG4 91 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 RNASE10Q5GAN6 216 aaKnown RBP6.3□□□□□ -1.4
DDB1-208ENST00000537120 OR5B3Q8NH48 314 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 SCARB1Q8WTV0 552 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 BSCL2Q96G97 398 aaPredicted RBP6.3□□□□□ -1.4
DDB1-208ENST00000537120 GGTLC1Q9BX51 225 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 FXYD6Q9H0Q3 95 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 KLK9Q9UKQ9 250 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 ANAPC10Q9UM13 185 aa6.3□□□□□ -1.4
DDB1-208ENST00000537120 CHTOPQ9Y3Y2 248 aaKnown RBP6.3□□□□□ -1.4
DDB1-208ENST00000537120 TENM2Q9NT68 2774 aa6.29□□□□□ -1.4
DDB1-208ENST00000537120 IGHV3OR16-8A0A075B7F1 116 aa6.29□□□□□ -1.4
DDB1-208ENST00000537120 NDUFA4O00483 81 aa6.29□□□□□ -1.4
DDB1-208ENST00000537120 NUPL2O15504 423 aaKnown RBP6.29□□□□□ -1.4
DDB1-208ENST00000537120 IFNA17P01571 189 aa6.29□□□□□ -1.4
DDB1-208ENST00000537120 S100A9P06702 114 aaKnown RBP6.29□□□□□ -1.4
DDB1-208ENST00000537120 ZNF182P17025 639 aaPredicted RBP6.29□□□□□ -1.4
DDB1-208ENST00000537120 SNCAP37840 140 aa6.29□□□□□ -1.4
DDB1-208ENST00000537120 UCP3P55916 312 aa6.29□□□□□ -1.4
DDB1-208ENST00000537120 AARDQ4LEZ3 155 aa6.29□□□□□ -1.4
DDB1-208ENST00000537120 LINC00322Q6ZN03 302 aaPredicted RBP6.29□□□□□ -1.4
DDB1-208ENST00000537120 CADM3Q8N126 398 aa6.29□□□□□ -1.4
DDB1-208ENST00000537120 RNASE11Q8TAA1 199 aaKnown RBP6.29□□□□□ -1.4
DDB1-208ENST00000537120 C15orf40Q8WUR7 153 aa6.29□□□□□ -1.4
DDB1-208ENST00000537120 PINX1Q96BK5 328 aaKnown RBP6.29□□□□□ -1.4
DDB1-208ENST00000537120 PDCD10Q9BUL8 212 aa6.29□□□□□ -1.4
DDB1-208ENST00000537120 ZNF436Q9C0F3 470 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms