RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 EFNB3Q15768 340 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 WDR31Q8NA23 367 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 OR4S2Q8NH73 311 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 SLC25A40Q8TBP6 338 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 SARAFQ96BY9 339 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 MS4A5Q9H3V2 200 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 PRR33A8MZF0 331 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 CGAP01215 116 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 CCL2P13500 99 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 CD59P13987 128 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 CCNOP22674 350 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 KIR3DL3Q8N743 410 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 G3V4G9 280 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 PAX2Q02962 417 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 IBA57Q5T440 356 aaKnown RBP12.88□□□□□ -0.35
CHFR-213ENST00000536843 SPATA31B1PQ5VZV4 182 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 TAAR6Q96RI8 345 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 TTTY12Q9BZ98 90 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 B4GALT7Q9UBV7 327 aa12.88□□□□□ -0.35
CHFR-213ENST00000536843 LSM4Q9Y4Z0 139 aaKnown RBP12.88□□□□□ -0.35
CHFR-213ENST00000536843 IGLV2-8P01709 118 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 GATA2P23769 480 aaPredicted RBP12.87□□□□□ -0.35
CHFR-213ENST00000536843 FER1L6-AS1Q8NA97 138 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 LINC00470Q9BZP3 86 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 PKIBQ9C010 78 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 GP6Q9HCN6 339 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 ZNF503-AS2A6NEH8 195 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 SS18L1O75177 396 aaPredicted RBP12.87□□□□□ -0.35
CHFR-213ENST00000536843 FOXH1O75593 365 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 OR2J3O76001 311 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 RNFT1Q5M7Z0 435 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 FAM120AOSQ5T036 256 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 RNASEKQ6P5S7 137 aaKnown RBP12.87□□□□□ -0.35
CHFR-213ENST00000536843 TMEM251Q8N6I4 163 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 POM121L2Q96KW2 1035 aa12.87□□□□□ -0.35
CHFR-213ENST00000536843 C21orf140B9A014 251 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 C3orf80F5H4A9 247 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 CDX4O14627 284 aaPredicted RBP12.86□□□□□ -0.35
CHFR-213ENST00000536843 CA6P23280 308 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 GNG3P63215 75 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 HIST1H1AQ02539 215 aaPredicted RBP12.86□□□□□ -0.35
CHFR-213ENST00000536843 C3AR1Q16581 482 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 NRN1LQ496H8 165 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 TMEM164Q5U3C3 297 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 UFSP1Q6NVU6 142 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 ZNF808Q8N4W9 903 aaPredicted RBP12.86□□□□□ -0.35
CHFR-213ENST00000536843 C1orf159Q96HA4 380 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 PRRG4Q9BZD6 226 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 SCRT2Q9NQ03 307 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 ABI3Q9P2A4 366 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 C5orf49A4QMS7 147 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 MT-CO3P00414 261 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 PLGLB1Q02325 96 aa12.86□□□□□ -0.35
CHFR-213ENST00000536843 SLC25A10Q9UBX3 287 aaPredicted RBP12.86□□□□□ -0.35
CHFR-213ENST00000536843 OR7C2O60412 319 aa12.85□□□□□ -0.35
CHFR-213ENST00000536843 OR2H2O95918 312 aa12.85□□□□□ -0.35
CHFR-213ENST00000536843 SSMEM1Q8WWF3 244 aa12.85□□□□□ -0.35
CHFR-213ENST00000536843 IGF2BP2-AS1Q96M15 143 aa12.85□□□□□ -0.35
CHFR-213ENST00000536843 CLEC5AQ9NY25 188 aa12.85□□□□□ -0.35
CHFR-213ENST00000536843 FREM1Q5H8C1 2179 aa12.85□□□□□ -0.35
CHFR-213ENST00000536843 hDV102S1A0JD36 115 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 FAM162BQ5T6X4 162 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 STPG3Q8N7X2 389 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 TMEM167BQ9NRX6 74 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 SYS1-DBNDD2H3BUS1 97 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 RHBDL1O75783 438 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 PPOXP50336 477 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 GDF5OSQ5U4N7 250 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 SLC35E4Q6ICL7 350 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 OR1B1Q8NGR6 318 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 NPVFQ9HCQ7 196 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 SERTAD4Q9NUC0 356 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 ZNF835Q9Y2P0 537 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 MPC1Q9Y5U8 109 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 ZNF318Q5VUA4 2279 aa12.84□□□□□ -0.35
CHFR-213ENST00000536843 GAGE10A6NGK3 116 aa12.83□□□□□ -0.35
CHFR-213ENST00000536843 J3QT63 122 aa12.83□□□□□ -0.35
CHFR-213ENST00000536843 BMI1P35226 326 aa12.83□□□□□ -0.35
CHFR-213ENST00000536843 RPL8P62917 257 aaKnown RBP12.83□□□□□ -0.35
CHFR-213ENST00000536843 RBPJQ06330 500 aa12.83□□□□□ -0.35
CHFR-213ENST00000536843 DHRS13Q6UX07 377 aa12.83□□□□□ -0.35
CHFR-213ENST00000536843 URB1-AS1Q96HZ7 61 aa12.83□□□□□ -0.35
CHFR-213ENST00000536843 FAM90A9PA6NNJ1 464 aa12.83□□□□□ -0.36
CHFR-213ENST00000536843 OR9G9P0C7N8 305 aa12.83□□□□□ -0.36
CHFR-213ENST00000536843 VDAC2P45880 294 aaPredicted RBP12.83□□□□□ -0.36
CHFR-213ENST00000536843 MEOX1P50221 254 aa12.83□□□□□ -0.36
CHFR-213ENST00000536843 OR2T6Q8NHC8 308 aa12.83□□□□□ -0.36
CHFR-213ENST00000536843 MBD6Q96DN6 1003 aa12.83□□□□□ -0.36
CHFR-213ENST00000536843 C7orf71A4D174 169 aa12.82□□□□□ -0.36
CHFR-213ENST00000536843 ANKRD30BLA7E2S9 258 aa12.82□□□□□ -0.36
CHFR-213ENST00000536843 NGFP01138 241 aa12.82□□□□□ -0.36
CHFR-213ENST00000536843 GTF2H5Q6ZYL4 71 aa12.82□□□□□ -0.36
CHFR-213ENST00000536843 GALMQ96C23 342 aa12.82□□□□□ -0.36
CHFR-213ENST00000536843 TMEM191AQ9H0A3 160 aa12.82□□□□□ -0.36
CHFR-213ENST00000536843 MS4A6AQ9H2W1 248 aa12.82□□□□□ -0.36
CHFR-213ENST00000536843 CLCF1Q9UBD9 225 aa12.82□□□□□ -0.36
CHFR-213ENST00000536843 KNTC1P50748 2209 aa12.82□□□□□ -0.36
CHFR-213ENST00000536843 SP1P08047 785 aa12.82□□□□□ -0.36
CHFR-213ENST00000536843 MGST1P10620 155 aaKnown RBP12.82□□□□□ -0.36
CHFR-213ENST00000536843 SPINK2P20155 84 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms