RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 LINC00854A0A1B0GVQ3 168 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 PRAF2O60831 178 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 SNAPC5O75971 98 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 CD3DP04234 171 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 S100GP29377 79 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 ERVK-16P61578 105 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 EXOSC2Q13868 293 aaKnown RBP9.46□□□□□ -0.9
PRKDC-207ENST00000536483 RNASE10Q5GAN6 216 aaKnown RBP9.46□□□□□ -0.9
PRKDC-207ENST00000536483 GPHB5Q86YW7 130 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 DMBX1Q8NFW5 382 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 OR1L8Q8NGR8 309 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 OR5B3Q8NH48 314 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 TERB2Q8NHR7 220 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 SEC22AQ96IW7 307 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 ATP6V0BQ99437 205 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 EDA2RQ9HAV5 297 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 FKBP11Q9NYL4 201 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 FBXL7Q9UJT9 491 aa9.46□□□□□ -0.9
PRKDC-207ENST00000536483 LGALS9O00182 355 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 OR2J3O76001 311 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 NDUFB8O95169 186 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 KRASP01116 189 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 TCRBP04435 133 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 IFNA6P05013 189 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 CSN3P07498 182 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 MYOD1P15172 320 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 RPA2P15927 270 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 SYNJ2BPP57105 145 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 TAS2R19P59542 299 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 RPEL1Q2QD12 228 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 ADAMTSL5Q6ZMM2 481 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 TBC1D26Q86UD7 250 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 TCTE3Q8IZS6 198 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 TMEM14BQ9NUH8 114 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 C19orf73Q9NVV2 129 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 PRNDQ9UKY0 176 aa9.45□□□□□ -0.9
PRKDC-207ENST00000536483 PAIP2BQ9ULR5 123 aaKnown RBP9.45□□□□□ -0.9
PRKDC-207ENST00000536483 TRBV7-1A0A0A6YYK4 115 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 ANKRD20A5PA0PJZ0 165 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 C7orf66A4D0T2 115 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 A8MZ25 164 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 M0QYG6 137 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 GGCTO75223 188 aaKnown RBP9.44□□□□□ -0.9
PRKDC-207ENST00000536483 B3GALNT1O75752 331 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 IGKV1-39P01597 117 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 IGKV1D-39P04432 117 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 SERPINE2P07093 398 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 DEFA5Q01523 94 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 WT1-ASQ06250 92 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 PHLDA2Q53GA4 152 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 OR2K2Q8NGT1 345 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 VN1R17PQ8TDU5 208 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 CXorf58Q96LI9 332 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 CCDC140Q96MF4 163 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 THYN1Q9P016 225 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 PEMTQ9UBM1 199 aa9.44□□□□□ -0.9
PRKDC-207ENST00000536483 PLECQ15149 4684 aaKnown RBP9.43□□□□□ -0.9
PRKDC-207ENST00000536483 C15orf61A6NNL5 157 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 H0Y980 276 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 P0C879 139 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 BTCP35070 178 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 G6PCP35575 357 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 RRAS2P62070 204 aaPredicted RBP9.43□□□□□ -0.9
PRKDC-207ENST00000536483 MEF2DQ14814 521 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 SURF2Q15527 256 aaPredicted RBP9.43□□□□□ -0.9
PRKDC-207ENST00000536483 STEAP1BQ6NZ63 245 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 C19orf35Q6ZS72 473 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 SGPP2Q8IWX5 399 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 OR4D10Q8NGI6 311 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 OR1L6Q8NGR2 347 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 ZNF502Q8TBZ5 544 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 ZFAND1Q8TCF1 268 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 LSM10Q969L4 123 aaKnown RBP9.43□□□□□ -0.9
PRKDC-207ENST00000536483 MRGPRFQ96AM1 343 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 EEF1AKMT3Q96AZ1 226 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 ST6GAL2Q96JF0 529 aa9.43□□□□□ -0.9
PRKDC-207ENST00000536483 A8MWP6 167 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 INS-IGF2F8WCM5 200 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 CYB5BO43169 146 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 RAB3DO95716 219 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 IL5P05113 134 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 CTSDP07339 412 aaPredicted RBP9.42□□□□□ -0.9
PRKDC-207ENST00000536483 H2AFB2P0C5Z0 115 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 DEFA4P12838 97 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 ZFP69Q49AA0 526 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 OR10W1Q8NGF6 305 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 MCUBQ9NWR8 336 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 SLC2A8Q9NY64 477 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 OR51B2Q9Y5P1 312 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 F11RQ9Y624 299 aaKnown RBP9.42□□□□□ -0.9
PRKDC-207ENST00000536483 ALG5Q9Y673 324 aa9.42□□□□□ -0.9
PRKDC-207ENST00000536483 DBX1A6NMT0 343 aa9.41□□□□□ -0.9
PRKDC-207ENST00000536483 REG1AP05451 166 aa9.41□□□□□ -0.9
PRKDC-207ENST00000536483 OR13C7P0DN81 318 aa9.41□□□□□ -0.9
PRKDC-207ENST00000536483 UCP1P25874 307 aa9.41□□□□□ -0.9
PRKDC-207ENST00000536483 PIGPP57054 158 aa9.41□□□□□ -0.9
PRKDC-207ENST00000536483 AARDQ4LEZ3 155 aa9.41□□□□□ -0.9
PRKDC-207ENST00000536483 ZNF114Q8NC26 417 aa9.41□□□□□ -0.9
PRKDC-207ENST00000536483 OR1P1Q8NH06 330 aa9.41□□□□□ -0.9
PRKDC-207ENST00000536483 TMEM56Q96MV1 263 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms