RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 C8orf86Q6ZUL3 223 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 BPIFA4PQ86YQ2 179 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 SFTPA2Q8IWL1 248 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 SPACA3Q8IXA5 215 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 PTH2Q96A98 100 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 GALMQ96C23 342 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 LRRC3BQ96PB8 259 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 GPX7Q96SL4 187 aaPredicted RBP3.09□□□□□ -1.91
MCF2-210ENST00000536274 PSMG3Q9BT73 122 aaPredicted RBP3.09□□□□□ -1.91
MCF2-210ENST00000536274 TMEM70Q9BUB7 260 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 HES4Q9HCC6 221 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 TBC1D29Q9UFV1 150 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 RALYQ9UKM9 306 aaKnown RBP3.09□□□□□ -1.91
MCF2-210ENST00000536274 V9GYV3 84 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 PI4KAP42356 2102 aa3.09□□□□□ -1.91
MCF2-210ENST00000536274 ZDBF2Q9HCK1 2354 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 CSMD1Q96PZ7 3565 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 HCFC1P51610 2035 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 C5orf49A4QMS7 147 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 PRSS29PA6NIE9 313 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 F5H5K5 113 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 KLF7O75840 302 aaPredicted RBP3.09□□□□□ -1.92
MCF2-210ENST00000536274 VENTXO95231 258 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 EML2O95834 649 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 ARL3P36405 182 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 LINC00205P59089 165 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 RPL27P61353 136 aaKnown RBP3.09□□□□□ -1.92
MCF2-210ENST00000536274 RPL31P62899 125 aaKnown RBP3.09□□□□□ -1.92
MCF2-210ENST00000536274 TCTEX1D4Q5JR98 221 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 FAM120AOSQ5T036 256 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 SLC35E4Q6ICL7 350 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 FAM53AQ6NSI3 398 aaPredicted RBP3.09□□□□□ -1.92
MCF2-210ENST00000536274 OR10D3Q8NH80 312 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 LINC00479Q96M42 142 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 SCNM1Q9BWG6 230 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 MRPL16Q9NX20 251 aaKnown RBP3.09□□□□□ -1.92
MCF2-210ENST00000536274 HS3ST2Q9Y278 367 aa3.09□□□□□ -1.92
MCF2-210ENST00000536274 TMSB15BA0A087X1C1 80 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 CTXND1A0A1B0GTU2 59 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 A4D1N5 150 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 ZNF716A6NP11 495 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 C16orf97H3BN30 126 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 SYS1-DBNDD2H3BUS1 97 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 IGKV1-39P01597 117 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 IGKV1D-39P04432 117 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 ARL14EPLP0DKL9 152 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 CRYBB3P26998 211 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 ZNF137PP52743 207 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 RHOBP62745 196 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 DIAPH2-AS1Q14236 149 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 GUSBP1Q15486 140 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 ZNF585BQ52M93 769 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 PQLC2Q6ZP29 291 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 WFDC3Q8IUB2 231 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 PCP2Q8IVA1 136 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 BCORP1Q8N888 145 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 LYZL4Q96KX0 146 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 SPATA25Q9BR10 227 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 TM2D2Q9BX73 214 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 IL36RNQ9UBH0 155 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 HSPB8Q9UJY1 196 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 ERG28Q9UKR5 140 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 EXPH5Q8NEV8 1989 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 IGKV1-27A0A075B6S5 117 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 IGHV1OR15-9A0A0B4J2B8 117 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 LOC107984640A0A0U1RRK4 108 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 NKX2-8O15522 239 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 SYNGR2O43760 224 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 CGAP01215 116 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 NHLRC4P0CG21 123 aaPredicted RBP3.08□□□□□ -1.92
MCF2-210ENST00000536274 PLA2G2AP14555 144 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 GCSHP23434 173 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 GPM6AP51674 278 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 FXYD2P54710 66 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 OR1D5P58170 312 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 POLR2LP62875 67 aaKnown RBP3.08□□□□□ -1.92
MCF2-210ENST00000536274 GAGE5Q13069 117 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 GAGE6Q13070 117 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 SRSF9Q13242 221 aaKnown RBP eCLIP3.08□□□□□ -1.92
MCF2-210ENST00000536274 OR10J3Q5JRS4 329 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 OR10X1Q8NGY0 326 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 OR52E5Q8NH55 327 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 FGFBP3Q8TAT2 258 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 SPSB4Q96A44 273 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 CDIP1Q9H305 208 aa3.08□□□□□ -1.92
MCF2-210ENST00000536274 TRAV36DV7A0A075B6V5 113 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 IGHV1-24A0A0C4DH33 117 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 H3BRM9 83 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 NKX2-2O95096 273 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 TGFAP01135 160 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 FABP2P12104 132 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 KIR2DL2P43627 348 aaPredicted RBP3.07□□□□□ -1.92
MCF2-210ENST00000536274 Q6ZS52 159 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 Q8N3U1 123 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 ZNF418Q8TF45 676 aaPredicted RBP3.07□□□□□ -1.92
MCF2-210ENST00000536274 GNB1LQ9BYB4 327 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 ZNF442Q9H7R0 627 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 ZNF257Q9Y2Q1 563 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 PTRH2Q9Y3E5 179 aaKnown RBP3.07□□□□□ -1.92
MCF2-210ENST00000536274 USP24Q9UPU5 2620 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms