RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TAS2R30P59541 319 aa9.05□□□□□ -0.96
CDCA3-206ENST00000536241 RPL23AP62750 156 aaKnown RBP9.05□□□□□ -0.96
CDCA3-206ENST00000536241 C19orf35Q6ZS72 473 aa9.05□□□□□ -0.96
CDCA3-206ENST00000536241 HSD17B13Q7Z5P4 300 aaPredicted RBP9.05□□□□□ -0.96
CDCA3-206ENST00000536241 ZNF546Q86UE3 836 aa9.05□□□□□ -0.96
CDCA3-206ENST00000536241 Q8N2B8 174 aa9.05□□□□□ -0.96
CDCA3-206ENST00000536241 TTC9CQ8N5M4 171 aa9.05□□□□□ -0.96
CDCA3-206ENST00000536241 DCUN1D4Q92564 292 aa9.05□□□□□ -0.96
CDCA3-206ENST00000536241 TMEM68Q96MH6 324 aa9.05□□□□□ -0.96
CDCA3-206ENST00000536241 P2RX4Q99571 388 aa9.05□□□□□ -0.96
CDCA3-206ENST00000536241 PAIP2BQ9ULR5 123 aaKnown RBP9.05□□□□□ -0.96
CDCA3-206ENST00000536241 TEP1Q99973 2627 aaKnown RBP9.04□□□□□ -0.96
CDCA3-206ENST00000536241 FXYD6-FXYD2A0A087WZ82 144 aa9.04□□□□□ -0.96
CDCA3-206ENST00000536241 C15orf62A8K5M9 175 aa9.04□□□□□ -0.96
CDCA3-206ENST00000536241 PRH1P02810 166 aa9.04□□□□□ -0.96
CDCA3-206ENST00000536241 RNASE2P10153 161 aaKnown RBP9.04□□□□□ -0.96
CDCA3-206ENST00000536241 CTRB1P17538 263 aa9.04□□□□□ -0.96
CDCA3-206ENST00000536241 P2RY1P47900 373 aa9.04□□□□□ -0.96
CDCA3-206ENST00000536241 CAV2P51636 162 aa9.04□□□□□ -0.96
CDCA3-206ENST00000536241 CRIP2P52943 208 aaPredicted RBP9.04□□□□□ -0.96
CDCA3-206ENST00000536241 RPL15P61313 204 aaKnown RBP9.04□□□□□ -0.96
CDCA3-206ENST00000536241 CTRB2Q6GPI1 263 aa9.04□□□□□ -0.96
CDCA3-206ENST00000536241 MRPL41Q8IXM3 137 aaKnown RBP9.04□□□□□ -0.96
CDCA3-206ENST00000536241 STPG2Q8N412 459 aa9.04□□□□□ -0.96
CDCA3-206ENST00000536241 TMEM170AQ8WVE7 144 aa9.04□□□□□ -0.96
CDCA3-206ENST00000536241 OR4C12Q96R67 309 aa9.04□□□□□ -0.96
CDCA3-206ENST00000536241 STRAPQ9Y3F4 350 aaKnown RBP9.04□□□□□ -0.96
CDCA3-206ENST00000536241 NPIPB5A8MRT5 1133 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 TSC22D2O75157 780 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 FBXO24O75426 580 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 LY86O95711 162 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 C1QBP02746 253 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 CRYGCP07315 174 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 DEFA4P12838 97 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
CDCA3-206ENST00000536241 HTR2BP41595 481 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 SUB1P53999 127 aaKnown RBP eCLIP9.03□□□□□ -0.96
CDCA3-206ENST00000536241 MFAP2P55001 183 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 RPP30P78346 268 aaKnown RBP9.03□□□□□ -0.96
CDCA3-206ENST00000536241 BSXQ3C1V8 233 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 C2orf83Q53S99 150 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 C19orf54Q5BKX5 351 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 SLC25A24Q6NUK1 477 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 ZNF329Q86UD4 541 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 TMEM252Q8N6L7 170 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 SLC24A4Q8NFF2 622 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 OR2T6Q8NHC8 308 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 ZNF355PQ9NSJ1 428 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 LYRM2Q9NU23 88 aaPredicted RBP9.03□□□□□ -0.96
CDCA3-206ENST00000536241 SERTAD4Q9NUC0 356 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 CUBNO60494 3623 aa9.03□□□□□ -0.96
CDCA3-206ENST00000536241 ARPC5O15511 151 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 SOX15O60248 233 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 IFNA4P05014 189 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 METTL15P1P0C7V9 234 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 HKR1P10072 659 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 NPY1RP25929 384 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 RPL12P30050 165 aaKnown RBP9.02□□□□□ -0.96
CDCA3-206ENST00000536241 NHLH2Q02577 135 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 MLANAQ16655 118 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 TMEM65Q6PI78 240 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 TMEM14EPQ6UXP3 125 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 NOXA1Q86UR1 476 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 FAM110DQ8TAY7 271 aaPredicted RBP9.02□□□□□ -0.96
CDCA3-206ENST00000536241 MS4A10Q96PG2 267 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 DMRT1Q9Y5R6 373 aa9.02□□□□□ -0.96
CDCA3-206ENST00000536241 F11RQ9Y624 299 aaKnown RBP9.02□□□□□ -0.96
CDCA3-206ENST00000536241 IGSF23A1L1A6 192 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 PMS2P5A8MQ11 134 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 HMSDA8MTL9 139 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 CST7O76096 145 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 AP2S1P53680 142 aaPredicted RBP9.02□□□□□ -0.97
CDCA3-206ENST00000536241 RAB11AP62491 216 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 ZFP69Q49AA0 526 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 OR8G2PQ6IF36 304 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 C10orf99Q6UWK7 81 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 ETV3LQ6ZN32 361 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 CENPVQ7Z7K6 275 aaPredicted RBP9.02□□□□□ -0.97
CDCA3-206ENST00000536241 ZNF114Q8NC26 417 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 OR1P1Q8NH06 330 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 LINC01006Q8NI28 216 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 BSCL2Q96G97 398 aaPredicted RBP9.02□□□□□ -0.97
CDCA3-206ENST00000536241 HYLS1Q96M11 299 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 FANCD2OSQ96PS1 177 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 SLC25A31Q9H0C2 315 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 C16orf95Q9H693 158 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 TNFSF18Q9UNG2 199 aa9.02□□□□□ -0.97
CDCA3-206ENST00000536241 OR8U8P0C7N1 319 aa9.01□□□□□ -0.97
CDCA3-206ENST00000536241 NUP62P37198 522 aaPredicted RBP9.01□□□□□ -0.97
CDCA3-206ENST00000536241 EIF2B2P49770 351 aaKnown RBP9.01□□□□□ -0.97
CDCA3-206ENST00000536241 NKX2-5P52952 324 aaPredicted RBP9.01□□□□□ -0.97
CDCA3-206ENST00000536241 ATP5IP56385 69 aaPredicted RBP9.01□□□□□ -0.97
CDCA3-206ENST00000536241 CFHR3Q02985 330 aa9.01□□□□□ -0.97
CDCA3-206ENST00000536241 ARL16Q0P5N6 197 aa9.01□□□□□ -0.97
CDCA3-206ENST00000536241 PVRIGQ6DKI7 326 aa9.01□□□□□ -0.97
CDCA3-206ENST00000536241 HAPLN4Q86UW8 402 aa9.01□□□□□ -0.97
CDCA3-206ENST00000536241 TMEM217Q8N7C4 229 aa9.01□□□□□ -0.97
CDCA3-206ENST00000536241 INO80EQ8NBZ0 244 aaPredicted RBP9.01□□□□□ -0.97
CDCA3-206ENST00000536241 PINX1Q96BK5 328 aaKnown RBP9.01□□□□□ -0.97
CDCA3-206ENST00000536241 MISP3Q96FF7 219 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms