RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 ZNF320A2RRD8 509 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 C15orf61A6NNL5 157 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 DEFB108AA8MXU0 73 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 RBMXL2O75526 392 aaKnown RBP4.69□□□□□ -1.66
VPS33A-203ENST00000536212 CRYAAP02489 173 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 ARL14EPLP0DKL9 152 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 DEFA4P12838 97 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 THBS3P49746 956 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 FABP6P51161 128 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 ZNF134P52741 427 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 ATP5IP56385 69 aaPredicted RBP4.69□□□□□ -1.66
VPS33A-203ENST00000536212 HSPE1P61604 102 aaKnown RBP4.69□□□□□ -1.66
VPS33A-203ENST00000536212 KRTAP1-1Q07627 177 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 IQCJQ1A5X6 159 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 CLEC12BQ2HXU8 276 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 C17orf58Q2M2W7 97 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 TMEM30BQ3MIR4 351 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 ATP1A1-AS1Q5TC04 95 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 CST9LP1Q5W188 147 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 VWA1Q6PCB0 445 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 TEX38Q6PEX7 206 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 DHRS13Q6UX07 377 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 TGIF2LXQ8IUE1 241 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 KIR2DL5AQ8N109 375 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 OR10G8Q8NGN5 311 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 OR4S2Q8NH73 311 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 FAM222BQ8WU58 562 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 SARAFQ96BY9 339 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 MBD6Q96DN6 1003 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 ADTRPQ96IZ2 230 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 ZNF48Q96MX3 618 aaPredicted RBP4.69□□□□□ -1.66
VPS33A-203ENST00000536212 S1PR3Q99500 378 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 DERL1Q9BUN8 251 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 PATZ1Q9HBE1 687 aaKnown RBP4.69□□□□□ -1.66
VPS33A-203ENST00000536212 MSL2Q9HCI7 577 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 RAB9BQ9NP90 201 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 TMEM14BQ9NUH8 114 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 CALYQ9NYX4 217 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 IL36BQ9NZH7 164 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 GNG12Q9UBI6 72 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 TRAPPC1Q9Y5R8 145 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 DOCK10Q96BY6 2186 aa4.69□□□□□ -1.66
VPS33A-203ENST00000536212 TRAV17A0A0B4J275 112 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 MBD3L5A6NJ08 208 aaPredicted RBP4.68□□□□□ -1.66
VPS33A-203ENST00000536212 TMEM238C9JI98 176 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 TNFSF13O75888 250 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 MT-CO2P00403 227 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 IGHV3-13P01766 116 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 OR10J4P0C629 311 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 LINC00869P0C866 280 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 NPY1RP25929 384 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 TIMP3P35625 211 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 UBE2G2P60604 165 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 RHOBP62745 196 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 EDDM3AQ14507 147 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 EFNB3Q15768 340 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 TBR1Q16650 682 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 PRSS8Q16651 343 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 RPL39P5Q59GN2 51 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 CT45A1Q5HYN5 189 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 C1orf194Q5T5A4 169 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 DGAT2L7PQ6IED9 249 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 ABHD12Q8N2K0 398 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 PNKDQ8N490 385 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 CNEP1R1Q8N9A8 125 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 LINC01356Q8N9X3 169 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 ZNF439Q8NDP4 499 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 CT45A3Q8NHU0 189 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 SGMS2Q8NHU3 365 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 MBD3L2Q8NHZ7 208 aaPredicted RBP4.68□□□□□ -1.66
VPS33A-203ENST00000536212 OCC1Q8TAD7 63 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 NEUROG1Q92886 237 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 STARD4Q96DR4 205 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 SDSLQ96GA7 329 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 FKBP11Q9NYL4 201 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 IDI2-AS1Q9NZ38 188 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 JKAMPQ9P055 326 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 PROCRQ9UNN8 238 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 ZNF257Q9Y2Q1 563 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 YTHDF2Q9Y5A9 579 aaKnown RBP4.68□□□□□ -1.66
VPS33A-203ENST00000536212 ARID1AO14497 2285 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 FREM1Q5H8C1 2179 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 REV3LO60673 3130 aa4.68□□□□□ -1.66
VPS33A-203ENST00000536212 SDK1Q7Z5N4 2213 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 IGLV3-9A0A075B6K5 115 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 TRBV9A0A0B4J1U6 114 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 KBTBD11-OT1A0A1B0GTJ5 212 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 INS-IGF2F8WCM5 200 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 K7EN84 100 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 M0R296 226 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 UPK2O00526 184 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 NUPR1O60356 82 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 CA2P00918 260 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 CRYGCP07315 174 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 OR4A8P0C604 315 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 OR5G3P0C626 314 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 OR10J1P30954 320 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 GLRXP35754 106 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 PTTG1IPP53801 180 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 ERVFC1-1P60608 527 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms