RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 A0A1W2PS18 150 aa14.81□□□□□ -0.04
RAB40C-203ENST00000535977 RBMXL2O75526 392 aaKnown RBP14.81□□□□□ -0.04
RAB40C-203ENST00000535977 IGHV3-13P01766 116 aa14.81□□□□□ -0.04
RAB40C-203ENST00000535977 PRRX1P54821 245 aa14.81□□□□□ -0.04
RAB40C-203ENST00000535977 OR4F17Q8NGA8 305 aa14.81□□□□□ -0.04
RAB40C-203ENST00000535977 OR10G8Q8NGN5 311 aa14.81□□□□□ -0.04
RAB40C-203ENST00000535977 RCHY1Q96PM5 261 aa14.81□□□□□ -0.04
RAB40C-203ENST00000535977 SNURFLB1AK76 121 aa14.8□□□□□ -0.04
RAB40C-203ENST00000535977 ZNF596Q8TC21 504 aa14.8□□□□□ -0.04
RAB40C-203ENST00000535977 LINC00473A8K010 186 aa14.8□□□□□ -0.04
RAB40C-203ENST00000535977 PDE6DO43924 150 aa14.8□□□□□ -0.04
RAB40C-203ENST00000535977 ZG16O60844 167 aa14.8□□□□□ -0.04
RAB40C-203ENST00000535977 TIMP3P35625 211 aa14.8□□□□□ -0.04
RAB40C-203ENST00000535977 KIR2DS2P43631 304 aa14.8□□□□□ -0.04
RAB40C-203ENST00000535977 RPS20P60866 119 aaKnown RBP14.8□□□□□ -0.04
RAB40C-203ENST00000535977 RFESDQ8TAC1 157 aa14.8□□□□□ -0.04
RAB40C-203ENST00000535977 KCNS1Q96KK3 526 aa14.8□□□□□ -0.04
RAB40C-203ENST00000535977 SLC17A3O00476 420 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 ZNF83P51522 516 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 OR5B3Q8NH48 314 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 GNG12Q9UBI6 72 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 IL19Q9UHD0 177 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 DUTP33316 252 aaKnown RBP14.79□□□□□ -0.04
RAB40C-203ENST00000535977 GLRXP35754 106 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 OR4A47Q6IF82 309 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 LHFPL4Q7Z7J7 247 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 NIT1Q86X76 327 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 MUC15Q8N387 334 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 TPRX1Q8N7U7 411 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 MRPL27Q9P0M9 148 aaKnown RBP14.79□□□□□ -0.04
RAB40C-203ENST00000535977 GTF3C1Q12789 2109 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 IGKV1D-17A0A075B6S4 117 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 IGHV3-43A0A0B4J1X8 118 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 F2RL2O00254 374 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 IGHV3-43DP0DP04 118 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 RIPPLY3P57055 190 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 LCN12Q6JVE5 192 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 PRR27Q6MZM9 219 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 C16orf54Q6UWD8 224 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 SEM1Q6ZVN7 128 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 PNKDQ8N490 385 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 OR52E5Q8NH55 327 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 IL36BQ9NZH7 164 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 DUSP13Q9UII6 198 aa14.79□□□□□ -0.04
RAB40C-203ENST00000535977 TMEM238LA0A1B0GVL6 79 aa14.78□□□□□ -0.04
RAB40C-203ENST00000535977 EDDM3AQ14507 147 aa14.78□□□□□ -0.04
RAB40C-203ENST00000535977 FAM53AQ6NSI3 398 aaPredicted RBP14.78□□□□□ -0.04
RAB40C-203ENST00000535977 SMIM12Q96EX1 92 aa14.78□□□□□ -0.04
RAB40C-203ENST00000535977 DEFB108AA8MXU0 73 aa14.77□□□□□ -0.04
RAB40C-203ENST00000535977 GFRA3O60609 400 aa14.77□□□□□ -0.04
RAB40C-203ENST00000535977 ERVK-16P61578 105 aa14.77□□□□□ -0.04
RAB40C-203ENST00000535977 FAM19A2Q8N3H0 131 aa14.77□□□□□ -0.04
RAB40C-203ENST00000535977 OCC1Q8TAD7 63 aa14.77□□□□□ -0.04
RAB40C-203ENST00000535977 NPCDR1Q9BY65 106 aa14.77□□□□□ -0.04
RAB40C-203ENST00000535977 URB1O60287 2271 aaKnown RBP14.77□□□□□ -0.05
RAB40C-203ENST00000535977 CACNA1DQ01668 2161 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 SAA2-SAA4A0A096LPE2 208 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 K7ERU9 68 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 TAX1BP3O14907 124 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 MPDU1O75352 247 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 ZNF324O75467 553 aaPredicted RBP14.77□□□□□ -0.05
RAB40C-203ENST00000535977 CA2P00918 260 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 TFF1P04155 84 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 LGALS4P56470 323 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 TFF3Q07654 80 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 KIAA1644Q3SXP7 199 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 PDLIM3Q53GG5 364 aaPredicted RBP14.77□□□□□ -0.05
RAB40C-203ENST00000535977 LRRC10Q5BKY1 277 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 STUMQ69YW2 141 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 GCSAMQ8N6F7 178 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 ZDHHC16Q969W1 377 aa14.77□□□□□ -0.05
RAB40C-203ENST00000535977 LHBP01229 141 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 NBEAP1P0C6P0 100 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 SELENOVP59797 346 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 MEGF9Q9H1U4 602 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 TRAV9-1A0A075B6T8 112 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 OR2T8A6NH00 312 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 M0R1B8 84 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 HOXA4Q00056 320 aaPredicted RBP14.76□□□□□ -0.05
RAB40C-203ENST00000535977 TMEM249Q2WGJ8 235 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 OR4A16Q8NH70 328 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 OR2V2Q96R30 315 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 QTRT1Q9BXR0 403 aaKnown RBP14.76□□□□□ -0.05
RAB40C-203ENST00000535977 ZNF430Q9H8G1 570 aaPredicted RBP14.76□□□□□ -0.05
RAB40C-203ENST00000535977 KCNIP2Q9NS61 270 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 USF3Q68DE3 2245 aa14.76□□□□□ -0.05
RAB40C-203ENST00000535977 FCGR3BO75015 233 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 GATA4P43694 442 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.75□□□□□ -0.05
RAB40C-203ENST00000535977 ST6GALNAC3Q8NDV1 305 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 DCTN5Q9BTE1 182 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 SFXN3Q9BWM7 321 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 IGLV3-9A0A075B6K5 115 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 CDC34P49427 236 aaPredicted RBP14.75□□□□□ -0.05
RAB40C-203ENST00000535977 RELBQ01201 579 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 PRAMEF5Q5TYX0 476 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 AMMECR1LQ6DCA0 310 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 S1PR3Q99500 378 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 TMEM204Q9BSN7 226 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 CLEC7AQ9BXN2 247 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms