RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SP5Q6BEB4 398 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-232ENST00000535094 OR9G1Q8NH87 305 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 GFRA3O60609 400 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 OR4A47Q6IF82 309 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 TMEM167BQ9NRX6 74 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 SELENOVP59797 346 aa13.15□□□□□ -0.3
MCF2L-232ENST00000535094 PMCHL1Q16048 86 aa13.15□□□□□ -0.3
MCF2L-232ENST00000535094 CORO2AQ92828 525 aa13.15□□□□□ -0.3
MCF2L-232ENST00000535094 DAZAP1Q96EP5 407 aaKnown RBP13.15□□□□□ -0.3
MCF2L-232ENST00000535094 WNT2P09544 360 aa13.15□□□□□ -0.3
MCF2L-232ENST00000535094 HSPE1P61604 102 aaKnown RBP13.15□□□□□ -0.3
MCF2L-232ENST00000535094 GABRA6Q16445 453 aa13.15□□□□□ -0.3
MCF2L-232ENST00000535094 OR2V2Q96R30 315 aa13.15□□□□□ -0.3
MCF2L-232ENST00000535094 BET1LQ9NYM9 111 aa13.15□□□□□ -0.3
MCF2L-232ENST00000535094 NAV3Q8IVL0 2385 aa13.15□□□□□ -0.31
MCF2L-232ENST00000535094 C9orf172C9J069 976 aa13.15□□□□□ -0.31
MCF2L-232ENST00000535094 RELBQ01201 579 aa13.15□□□□□ -0.31
MCF2L-232ENST00000535094 TPTE2P1Q5T6R2 138 aa13.15□□□□□ -0.31
MCF2L-232ENST00000535094 CD177Q8N6Q3 437 aa13.15□□□□□ -0.31
MCF2L-232ENST00000535094 PARD6GQ9BYG4 376 aaPredicted RBP13.15□□□□□ -0.31
MCF2L-232ENST00000535094 ZNF835Q9Y2P0 537 aa13.15□□□□□ -0.31
MCF2L-232ENST00000535094 LAMTOR2Q9Y2Q5 125 aa13.15□□□□□ -0.31
MCF2L-232ENST00000535094 TMPRSS2O15393 492 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 ERVK11-1P61568 191 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 MORN2Q502X0 79 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 RNFT1Q5M7Z0 435 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 CALYQ9NYX4 217 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 SPRR3Q9UBC9 169 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 TANC2Q9HCD6 1990 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 TRGV10A0A0A0MS01 117 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 GPX1P07203 203 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 CECR9P0C854 216 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 RPL8P62917 257 aaKnown RBP13.14□□□□□ -0.31
MCF2L-232ENST00000535094 CEP192Q8TEP8 1941 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 KIR2DL5BA0A0G2JN68 375 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 KIR2DL5BA0A0G2JPC4 375 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 HSBP1L1C9JCN9 74 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 APOA2P02652 100 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 C3orf79P0CE67 100 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 PYYP10082 97 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 TMEM144Q7Z5S9 345 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 KIR2DL5AQ8N109 375 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 VPS25Q9BRG1 176 aa13.14□□□□□ -0.31
MCF2L-232ENST00000535094 SLC25A5P05141 298 aaKnown RBP13.13□□□□□ -0.31
MCF2L-232ENST00000535094 CENPVQ7Z7K6 275 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-232ENST00000535094 OR10W1Q8NGF6 305 aa13.13□□□□□ -0.31
MCF2L-232ENST00000535094 CCL13Q99616 98 aa13.13□□□□□ -0.31
MCF2L-232ENST00000535094 MCRIP2Q9BUT9 160 aaKnown RBP13.13□□□□□ -0.31
MCF2L-232ENST00000535094 M0QZ24 198 aa13.13□□□□□ -0.31
MCF2L-232ENST00000535094 REG1AP05451 166 aa13.13□□□□□ -0.31
MCF2L-232ENST00000535094 LGALS4P56470 323 aa13.13□□□□□ -0.31
MCF2L-232ENST00000535094 OR2T6Q8NHC8 308 aa13.13□□□□□ -0.31
MCF2L-232ENST00000535094 RTL8BQ17RB0 113 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 FAM214BQ7L5A3 538 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 TXNDC17Q9BRA2 123 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 CLEC5AQ9NY25 188 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 IQCF6A8MYZ5 107 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 LINC00869P0C866 280 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 CD24P25063 80 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 PMCHL2Q9BQD1 86 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 WASHC3Q9Y3C0 194 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 MGST3O14880 152 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 ZNF324O75467 553 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-232ENST00000535094 INO80CQ6PI98 192 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-232ENST00000535094 C1orf210Q8IVY1 113 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 STPG4Q8N801 248 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 ITLN1Q8WWA0 313 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 GMPPAQ96IJ6 420 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-232ENST00000535094 OR8B2Q96RD0 313 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 BDP1A6H8Y1 2624 aa13.12□□□□□ -0.31
MCF2L-232ENST00000535094 ZNF134P52741 427 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 COL4A2P08572 1712 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 KMT2EQ8IZD2 1858 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 AHRRA9YTQ3 701 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 GNG5P63218 68 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 ERHP84090 104 aaKnown RBP13.11□□□□□ -0.31
MCF2L-232ENST00000535094 MRPS18CQ9Y3D5 142 aaKnown RBP13.11□□□□□ -0.31
MCF2L-232ENST00000535094 AMMECR1Q9Y4X0 333 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-232ENST00000535094 SAA2-SAA4A0A096LPE2 208 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 SNAI2O43623 268 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 AMY1AP04745 511 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 SAA2P0DJI9 122 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-232ENST00000535094 YPEL3P61236 119 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-232ENST00000535094 UTF1Q5T230 341 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 KCNS1Q96KK3 526 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 COL5A1P20908 1838 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-232ENST00000535094 COL6A3P12111 3177 aa13.11□□□□□ -0.31
MCF2L-232ENST00000535094 A0A1W2PS18 150 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 HLA-DQA1P01909 254 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 C1orf174Q8IYL3 243 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 OR1B1Q8NGR6 318 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 TP53TG3Q9ULZ0 132 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 RNF114Q9Y508 228 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 ZFHX2Q9C0A1 2572 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-232ENST00000535094 DYSFO75923 2080 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 IGHV3-72A0A0B4J1Y9 119 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 MT-ND6P03923 174 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 ZNF596Q8TC21 504 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 HARBI1Q96MB7 349 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms