RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 PGGHGQ32M88 737 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 SLC25A35Q3KQZ1 300 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 AKIRIN2Q53H80 203 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 UBE2NLQ5JXB2 153 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 AKR1C8PQ5T2L2 129 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 WDR25Q64LD2 544 aaPredicted RBP2.5□□□□□ -2.01
USP48-215ENST00000534705 PVRIGQ6DKI7 326 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 NOXRED1Q6NXP6 359 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 C1orf94Q6P1W5 598 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OPN5Q6U736 354 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 ZNF322Q6U7Q0 402 aaPredicted RBP2.5□□□□□ -2.01
USP48-215ENST00000534705 STAC2Q6ZMT1 411 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 DOLPP1Q86YN1 238 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 PRR22Q8IZ63 422 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 LINC01561Q8N1V8 128 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 SYS1Q8N2H4 156 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OR2L13Q8N349 312 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 LRRC25Q8N386 305 aaPredicted RBP2.5□□□□□ -2.01
USP48-215ENST00000534705 RPRMLQ8N4K4 120 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 LINC00471Q8N535 108 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 C11orf42Q8N5U0 333 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 TMEM156Q8N614 296 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 TMEM251Q8N6I4 163 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 KRTCAP2Q8N6L1 136 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 ZNF491Q8N8L2 437 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OR8G5Q8NG78 346 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OR10G3Q8NGC4 313 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OR52R1Q8NGF1 315 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OR5D18Q8NGL1 313 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OR10G4Q8NGN3 311 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OR8U1Q8NH10 309 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OR52E5Q8NH55 327 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 Q8WTZ3 238 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 ITLN2Q8WWU7 325 aaPredicted RBP2.5□□□□□ -2.01
USP48-215ENST00000534705 FRZBQ92765 325 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 CDS1Q92903 461 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 ISOC2Q96AB3 205 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 SMIM12Q96EX1 92 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 DNAJA3Q96EY1 480 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 SEC22AQ96IW7 307 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 PGLYRP3Q96LB9 341 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 IMMP2LQ96T52 175 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 KLHDC3Q9BQ90 382 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 SLC25A21Q9BQT8 299 aaPredicted RBP2.5□□□□□ -2.01
USP48-215ENST00000534705 SULT4A1Q9BR01 284 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 MIEN1Q9BRT3 115 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 TTTY12Q9BZ98 90 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 CHIAQ9BZP6 476 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 DPY30Q9C005 99 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OR2J1Q9GZK6 312 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 PPDPFQ9H3Y8 114 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 RBKSQ9H477 322 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 GLIPR2Q9H4G4 154 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 LRTM1Q9HBL6 345 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 MEPEQ9NQ76 525 aaPredicted RBP2.5□□□□□ -2.01
USP48-215ENST00000534705 ANAPC11Q9NYG5 84 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 EHFQ9NZC4 300 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 DHRS4-AS1Q9P1J3 65 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 SHPKQ9UHJ6 478 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 NAGKQ9UJ70 344 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 ZNF256Q9Y2P7 627 aaPredicted RBP2.5□□□□□ -2.01
USP48-215ENST00000534705 FAM215AQ9Y5M1 114 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 TANC2Q9HCD6 1990 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 ITPR3Q14573 2671 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 CREBBPQ92793 2442 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 ABCA2Q9BZC7 2435 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 TEP1Q99973 2627 aaKnown RBP2.49□□□□□ -2.01
USP48-215ENST00000534705 TRAV30A0A087WSZ9 112 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 IGHV2OR16-5A0A0B4J2B6 119 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 TVP23AA6NH52 213 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 FAM166BA8MTA8 275 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 ZNF705EA8MWA4 302 aaPredicted RBP2.49□□□□□ -2.01
USP48-215ENST00000534705 F6UZH7 168 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 KLRC4-KLRK1H3BQV0 150 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 C19orf84I3L1E1 186 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 CDIPTO14735 213 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 TAAR5O14804 337 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 SCAMP2O15127 329 aaKnown RBP2.49□□□□□ -2.01
USP48-215ENST00000534705 XRCC2O43543 280 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 TCF21O43680 179 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 VAMP5O95183 116 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 LY6G6DO95868 133 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 IGKV1D-16P01601 117 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 HPNP05981 417 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 CXCL1P09341 107 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 GIG44P09565 113 aaPredicted RBP2.49□□□□□ -2.01
USP48-215ENST00000534705 TRGC1P0CF51 173 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 ESDP10768 282 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 CELP19835 753 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 KLK2P20151 261 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 HTR1FP30939 366 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 S100A3P33764 101 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 CEACAM3P40198 252 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 CTRLP40313 264 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 LEPP41159 167 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 RBM34P42696 430 aaKnown RBP2.49□□□□□ -2.01
USP48-215ENST00000534705 CEBPGP53567 150 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 TAS2R43P59537 309 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 RPS11P62280 158 aaKnown RBP eCLIP2.49□□□□□ -2.01
USP48-215ENST00000534705 RPL8P62917 257 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms