RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 DLL3Q9NYJ7 618 aa15.87■□□□□ 0.13
SMPD1-210ENST00000534405 ANKRD30BLA7E2S9 258 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 K7EP34 96 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 SPINK4O60575 86 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 GP6Q9HCN6 339 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 TRAV38-1A0A0B4J264 116 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 C21orf140B9A014 251 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 SP1P08047 785 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 CEACAM3P40198 252 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 GNG3P63215 75 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 Q8N7P7 452 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 SIGMAR1Q99720 223 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 SCRT2Q9NQ03 307 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 OR1A1Q9P1Q5 309 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 OR2W1Q9Y3N9 320 aa15.86■□□□□ 0.13
SMPD1-210ENST00000534405 TRGV10A0A0A0MS01 117 aa15.85■□□□□ 0.13
SMPD1-210ENST00000534405 TRBV6-6A0A0A6YYG2 114 aa15.85■□□□□ 0.13
SMPD1-210ENST00000534405 MT-CO3P00414 261 aa15.85■□□□□ 0.13
SMPD1-210ENST00000534405 C11orf52Q96A22 123 aa15.85■□□□□ 0.13
SMPD1-210ENST00000534405 TMEM204Q9BSN7 226 aa15.85■□□□□ 0.13
SMPD1-210ENST00000534405 FNDC4Q9H6D8 234 aaPredicted RBP15.85■□□□□ 0.13
SMPD1-210ENST00000534405 MPC1Q9Y5U8 109 aa15.85■□□□□ 0.13
SMPD1-210ENST00000534405 ZNF718Q3SXZ3 478 aa15.85■□□□□ 0.13
SMPD1-210ENST00000534405 WDR82Q6UXN9 313 aa15.85■□□□□ 0.13
SMPD1-210ENST00000534405 WDR86Q86TI4 376 aa15.85■□□□□ 0.13
SMPD1-210ENST00000534405 MDP1Q86V88 176 aa15.85■□□□□ 0.13
SMPD1-210ENST00000534405 A0A1W2PPV4 95 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 CD59P13987 128 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 RPL31P62899 125 aaKnown RBP15.84■□□□□ 0.13
SMPD1-210ENST00000534405 SEC11AP67812 179 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 KLF5Q13887 457 aaPredicted RBP15.84■□□□□ 0.13
SMPD1-210ENST00000534405 KIR3DL3Q8N743 410 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 MDS2Q8NDY4 140 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 IL1F10Q8WWZ1 152 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 DEFB127Q9H1M4 99 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 IGLV2-14P01704 120 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 MC5RP33032 325 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 ZNF585BQ52M93 769 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 GCSAMLQ5JQS6 135 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 ATP1A1-AS1Q5TC04 95 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 Q6P435 159 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 LINC00596Q86U02 117 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 UBALD1Q8TB05 177 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 ZNF835Q9Y2P0 537 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 ARL2-SNX15V9GYD0 113 aa15.84■□□□□ 0.13
SMPD1-210ENST00000534405 C9orf118A6NHY6 69 aa15.83■□□□□ 0.12
SMPD1-210ENST00000534405 TMEM164Q5U3C3 297 aa15.83■□□□□ 0.12
SMPD1-210ENST00000534405 FAM216AQ8WUB2 273 aa15.83■□□□□ 0.12
SMPD1-210ENST00000534405 OR2D2Q9H210 308 aa15.83■□□□□ 0.12
SMPD1-210ENST00000534405 hDV102S1A0JD36 115 aa15.83■□□□□ 0.12
SMPD1-210ENST00000534405 ARL14EPLP0DKL9 152 aa15.83■□□□□ 0.12
SMPD1-210ENST00000534405 RAB9AP51151 201 aa15.83■□□□□ 0.12
SMPD1-210ENST00000534405 NPFFR1Q9GZQ6 430 aa15.83■□□□□ 0.12
SMPD1-210ENST00000534405 YTHDF2Q9Y5A9 579 aaKnown RBP15.83■□□□□ 0.12
SMPD1-210ENST00000534405 A0A087X0K7 114 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 IGHV3-64DA0A0J9YX35 117 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 STAG3L2P0CL84 134 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 STAG3L3P0CL85 134 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 DEFB123Q8N688 67 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 JMJD8Q96S16 334 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 GTSF1LQ9H1H1 148 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 OSTCQ9NRP0 149 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 TNFRSF19Q9NS68 423 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 TECRQ9NZ01 308 aaKnown RBP15.82■□□□□ 0.12
SMPD1-210ENST00000534405 SPRR3Q9UBC9 169 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 CXorf1O96002 111 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 GPR183P32249 361 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 SMAGPQ0VAQ4 97 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 SLAQ13239 276 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 PKIBQ9C010 78 aa15.82■□□□□ 0.12
SMPD1-210ENST00000534405 KLF13Q9Y2Y9 288 aaPredicted RBP15.82■□□□□ 0.12
SMPD1-210ENST00000534405 CDX4O14627 284 aaPredicted RBP15.81■□□□□ 0.12
SMPD1-210ENST00000534405 SLC35B1P78383 322 aa15.81■□□□□ 0.12
SMPD1-210ENST00000534405 SPACA3Q8IXA5 215 aa15.81■□□□□ 0.12
SMPD1-210ENST00000534405 SSBP4Q9BWG4 385 aaPredicted RBP15.81■□□□□ 0.12
SMPD1-210ENST00000534405 H3BRM9 83 aa15.8■□□□□ 0.12
SMPD1-210ENST00000534405 J3QT63 122 aa15.8■□□□□ 0.12
SMPD1-210ENST00000534405 PLP1P60201 277 aa15.8■□□□□ 0.12
SMPD1-210ENST00000534405 ALKBH6Q3KRA9 238 aa15.8■□□□□ 0.12
SMPD1-210ENST00000534405 DHRS13Q6UX07 377 aa15.8■□□□□ 0.12
SMPD1-210ENST00000534405 ZNF841Q6ZN19 808 aa15.8■□□□□ 0.12
SMPD1-210ENST00000534405 SMIM27A0A1W2PRY6 76 aa15.8■□□□□ 0.12
SMPD1-210ENST00000534405 CRYBA4P53673 196 aa15.8■□□□□ 0.12
SMPD1-210ENST00000534405 GABRA6Q16445 453 aa15.8■□□□□ 0.12
SMPD1-210ENST00000534405 SLC35E4Q6ICL7 350 aa15.8■□□□□ 0.12
SMPD1-210ENST00000534405 AP1S3Q96PC3 154 aa15.8■□□□□ 0.12
SMPD1-210ENST00000534405 LIN7CQ9NUP9 197 aaKnown RBP15.8■□□□□ 0.12
SMPD1-210ENST00000534405 TRAV26-1A0A087WT03 109 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 KLRC4-KLRK1H3BQV0 150 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 RRHO14718 337 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 FAM120AOSQ5T036 256 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 STXBP6Q8NFX7 210 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 OR5A1Q8NGJ0 315 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 WIPF2Q8TF74 440 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-210ENST00000534405 MS4A6AQ9H2W1 248 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 SAP30LQ9HAJ7 183 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 GTF3C1Q12789 2109 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-210ENST00000534405 OR2H2O95918 312 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 USF1P22415 310 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms