RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 FAM106CPP0CH98 169 aa14.46□□□□□ -0.09
PHRF1-206ENST00000534320 CIRBPQ14011 172 aaKnown RBP14.46□□□□□ -0.09
PHRF1-206ENST00000534320 ZNF497Q6ZNH5 498 aa14.46□□□□□ -0.09
PHRF1-206ENST00000534320 VENTXO95231 258 aa14.46□□□□□ -0.09
PHRF1-206ENST00000534320 FBLN7Q53RD9 439 aa14.46□□□□□ -0.09
PHRF1-206ENST00000534320 C5orf30Q96GV9 206 aa14.46□□□□□ -0.09
PHRF1-206ENST00000534320 HELZP42694 1942 aaKnown RBP14.46□□□□□ -0.09
PHRF1-206ENST00000534320 IGHV1-18A0A0C4DH31 117 aa14.46□□□□□ -0.1
PHRF1-206ENST00000534320 FOXF2Q12947 444 aa14.46□□□□□ -0.1
PHRF1-206ENST00000534320 KIAA1644Q3SXP7 199 aa14.46□□□□□ -0.1
PHRF1-206ENST00000534320 TUBA4BQ9H853 241 aa14.46□□□□□ -0.1
PHRF1-206ENST00000534320 DOCK9Q9BZ29 2069 aa14.46□□□□□ -0.1
PHRF1-206ENST00000534320 TMEM250H0YL14 139 aa14.45□□□□□ -0.1
PHRF1-206ENST00000534320 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.45□□□□□ -0.1
PHRF1-206ENST00000534320 RPRMQ9NS64 109 aa14.45□□□□□ -0.1
PHRF1-206ENST00000534320 OR11H12B2RN74 326 aa14.45□□□□□ -0.1
PHRF1-206ENST00000534320 OR11H1Q8NG94 326 aa14.45□□□□□ -0.1
PHRF1-206ENST00000534320 OR11H2Q8NH07 326 aa14.45□□□□□ -0.1
PHRF1-206ENST00000534320 LOC105371242A0A075B767 164 aa14.45□□□□□ -0.1
PHRF1-206ENST00000534320 ATXN7O15265 892 aaPredicted RBP14.45□□□□□ -0.1
PHRF1-206ENST00000534320 CACNA1DQ01668 2161 aa14.45□□□□□ -0.1
PHRF1-206ENST00000534320 TCF24Q7RTU0 167 aa14.45□□□□□ -0.1
PHRF1-206ENST00000534320 ZNF418Q8TF45 676 aaPredicted RBP14.45□□□□□ -0.1
PHRF1-206ENST00000534320 C17orf100A8MU93 164 aa14.45□□□□□ -0.1
PHRF1-206ENST00000534320 PLAUP00749 431 aa14.45□□□□□ -0.1
PHRF1-206ENST00000534320 NUP210Q8TEM1 1887 aaPredicted RBP14.45□□□□□ -0.1
PHRF1-206ENST00000534320 C7orf71A4D174 169 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 ARL14EPLP0DKL9 152 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 PNKDQ8N490 385 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 ICE1Q9Y2F5 2266 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 DNAL4O96015 105 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 SPSB4Q96A44 273 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 SPAG8Q99932 426 aaPredicted RBP14.44□□□□□ -0.1
PHRF1-206ENST00000534320 H0YIZ8 118 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 IL18BPO95998 194 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 RELQ04864 619 aaPredicted RBP14.44□□□□□ -0.1
PHRF1-206ENST00000534320 C2orf83Q53S99 150 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 RNF144BQ7Z419 303 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 LHFPL1Q86WI0 220 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 WNT10AQ9GZT5 417 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 ACACAQ13085 2346 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 LDLRAD2Q5SZI1 272 aa14.44□□□□□ -0.1
PHRF1-206ENST00000534320 ETV2O00321 342 aaPredicted RBP14.43□□□□□ -0.1
PHRF1-206ENST00000534320 HSPB7Q9UBY9 170 aa14.43□□□□□ -0.1
PHRF1-206ENST00000534320 ATP5IP56385 69 aaPredicted RBP14.43□□□□□ -0.1
PHRF1-206ENST00000534320 FOXL2NBQ6ZUU3 175 aa14.43□□□□□ -0.1
PHRF1-206ENST00000534320 BIVMQ86UB2 503 aa14.43□□□□□ -0.1
PHRF1-206ENST00000534320 PRDM13Q9H4Q3 707 aa14.43□□□□□ -0.1
PHRF1-206ENST00000534320 A0A087WWC5 75 aa14.43□□□□□ -0.1
PHRF1-206ENST00000534320 TMEM262E9PQX1 116 aa14.43□□□□□ -0.1
PHRF1-206ENST00000534320 REG1AP05451 166 aa14.43□□□□□ -0.1
PHRF1-206ENST00000534320 OSR1Q8TAX0 266 aaPredicted RBP14.43□□□□□ -0.1
PHRF1-206ENST00000534320 OR5A1Q8NGJ0 315 aa14.43□□□□□ -0.1
PHRF1-206ENST00000534320 RCC1LQ96I51 464 aaKnown RBP14.43□□□□□ -0.1
PHRF1-206ENST00000534320 PLSCR4Q9NRQ2 329 aa14.43□□□□□ -0.1
PHRF1-206ENST00000534320 RAXQ9Y2V3 346 aa14.43□□□□□ -0.1
PHRF1-206ENST00000534320 TBL2Q9Y4P3 447 aaKnown RBP14.43□□□□□ -0.1
PHRF1-206ENST00000534320 SCN8AQ9UQD0 1980 aa14.42□□□□□ -0.1
PHRF1-206ENST00000534320 QRFPP83859 136 aa14.42□□□□□ -0.1
PHRF1-206ENST00000534320 PRSS8Q16651 343 aa14.42□□□□□ -0.1
PHRF1-206ENST00000534320 OR4A5Q8NH83 315 aa14.42□□□□□ -0.1
PHRF1-206ENST00000534320 C8orf88P0DMB2 117 aa14.42□□□□□ -0.1
PHRF1-206ENST00000534320 WDR31Q8NA23 367 aa14.42□□□□□ -0.1
PHRF1-206ENST00000534320 PGLYRP4Q96LB8 373 aa14.42□□□□□ -0.1
PHRF1-206ENST00000534320 RPS20P60866 119 aaKnown RBP14.42□□□□□ -0.1
PHRF1-206ENST00000534320 ZNF414Q96IQ9 312 aa14.42□□□□□ -0.1
PHRF1-206ENST00000534320 BEX4Q9NWD9 120 aaPredicted RBP14.42□□□□□ -0.1
PHRF1-206ENST00000534320 WISP1O95388 367 aa14.42□□□□□ -0.1
PHRF1-206ENST00000534320 TFF1P04155 84 aa14.42□□□□□ -0.1
PHRF1-206ENST00000534320 NPCDR1Q9BY65 106 aa14.42□□□□□ -0.1
PHRF1-206ENST00000534320 C19orf54Q5BKX5 351 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 TMEM42Q69YG0 159 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 PCSK4Q6UW60 755 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 STPG3Q8N7X2 389 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 LINC00312Q9Y6C7 94 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 ZNF324BQ6AW86 544 aaPredicted RBP14.41□□□□□ -0.1
PHRF1-206ENST00000534320 ZNF524Q96C55 264 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 NABP2Q9BQ15 211 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 NPIPB6E9PJ23 425 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 CBLN1P23435 193 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 RIPPLY3P57055 190 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 SPACA3Q8IXA5 215 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 KCNS1Q96KK3 526 aa14.41□□□□□ -0.1
PHRF1-206ENST00000534320 LINC00614P0C842 121 aa14.4□□□□□ -0.1
PHRF1-206ENST00000534320 FXYD3Q14802 87 aa14.4□□□□□ -0.1
PHRF1-206ENST00000534320 H3BUT2 72 aa14.4□□□□□ -0.1
PHRF1-206ENST00000534320 TMEM177Q53S58 311 aa14.4□□□□□ -0.1
PHRF1-206ENST00000534320 OR4D5Q8NGN0 318 aa14.4□□□□□ -0.1
PHRF1-206ENST00000534320 NPIPB3Q92617 1050 aa14.4□□□□□ -0.1
PHRF1-206ENST00000534320 C19orf24Q9BVV8 132 aa14.4□□□□□ -0.1
PHRF1-206ENST00000534320 UBE2CO00762 179 aa14.4□□□□□ -0.1
PHRF1-206ENST00000534320 YPEL1O60688 119 aa14.4□□□□□ -0.1
PHRF1-206ENST00000534320 YPEL2Q96QA6 119 aa14.4□□□□□ -0.1
PHRF1-206ENST00000534320 SRSF7Q16629 238 aaKnown RBP eCLIP14.4□□□□□ -0.1
PHRF1-206ENST00000534320 PGPA6NDG6 321 aa14.39□□□□□ -0.11
PHRF1-206ENST00000534320 TIMP3P35625 211 aa14.39□□□□□ -0.11
PHRF1-206ENST00000534320 CA7P43166 264 aa14.39□□□□□ -0.11
PHRF1-206ENST00000534320 BEND2Q8NDZ0 799 aa14.39□□□□□ -0.11
PHRF1-206ENST00000534320 NUDT10Q8NFP7 164 aa14.39□□□□□ -0.11
PHRF1-206ENST00000534320 PHF3Q92576 2039 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms