RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 PIGPP57054 158 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 CASC10Q5T4H9 136 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 GSG1LQ6UXU4 331 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 SLC25A42Q86VD7 318 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 Q8N402 240 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 UBAC2Q8NBM4 344 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 SLIRPQ9GZT3 109 aaKnown RBP7.2□□□□□ -1.26
SSBP3-215ENST00000533946 UBQLN2Q9UHD9 624 aa7.2□□□□□ -1.26
SSBP3-215ENST00000533946 OR11H12B2RN74 326 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 H0Y980 276 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 RGS5O15539 181 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 ST8SIA3O43173 380 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 NXPH3O95157 252 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 RAB3DO95716 219 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 CTSGP08311 255 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 C8orf88P0DMB2 117 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 ETV6P41212 452 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 ERVK-16P61578 105 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 EWSR1Q01844 656 aaKnown RBP eCLIP7.19□□□□□ -1.263e-6■■■□□ 16.7
SSBP3-215ENST00000533946 MEF2DQ14814 521 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 SCGB2B2Q4G0G5 96 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 RNASE10Q5GAN6 216 aaKnown RBP7.19□□□□□ -1.26
SSBP3-215ENST00000533946 LCN12Q6JVE5 192 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 STEAP1BQ6NZ63 245 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 MZT2AQ6P582 158 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 CMTM1Q8IZ96 169 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 SLC38A6Q8IZM9 456 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 OR2C3Q8N628 320 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 TMEM229BQ8NBD8 167 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 OR4C16Q8NGL9 310 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 CD300LFQ8TDQ1 290 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 DYNLRB2Q8TF09 96 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 TMEM230Q96A57 120 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 MISP3Q96FF7 219 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 SOSTQ9BQB4 213 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 ZNF436Q9C0F3 470 aaPredicted RBP7.19□□□□□ -1.26
SSBP3-215ENST00000533946 HIPK2Q9H2X6 1198 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 C5orf66Q9H5L9 145 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 SRD5A3Q9H8P0 318 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 CEPT1Q9Y6K0 416 aa7.19□□□□□ -1.26
SSBP3-215ENST00000533946 TRBV7-1A0A0A6YYK4 115 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 IGHV3-66A0A0C4DH42 116 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 A8MWP6 167 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 SNAPC5O75971 98 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 HIST1H1BP16401 226 aaKnown RBP7.18□□□□□ -1.26
SSBP3-215ENST00000533946 TNFSF8P32971 234 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 TATDN3Q17R31 274 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 PLET1Q6UQ28 207 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 H2BFWTQ7Z2G1 175 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 SGPP2Q8IWX5 399 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 MUC7Q8TAX7 377 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 GLYATL2Q8WU03 294 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 TMEM170AQ8WVE7 144 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 LSM10Q969L4 123 aaKnown RBP7.18□□□□□ -1.26
SSBP3-215ENST00000533946 ISOC1Q96CN7 298 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 C20orf24Q9BUV8 137 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 FNDC4Q9H6D8 234 aaPredicted RBP7.18□□□□□ -1.26
SSBP3-215ENST00000533946 TUBA4BQ9H853 241 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 C21orf62Q9NYP8 219 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 PEMTQ9UBM1 199 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 VPS13DQ5THJ4 4388 aa7.18□□□□□ -1.26
SSBP3-215ENST00000533946 AGRNO00468 2067 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 C3orf85A0A1B0GTC6 90 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 GABARAPH6UMI1 98 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 MT-CO2P00403 227 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 OR5AC1P0C628 307 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 RND3P61587 244 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 HSPE1P61604 102 aaKnown RBP7.17□□□□□ -1.26
SSBP3-215ENST00000533946 PRCDQ00LT1 54 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 DCTN2Q13561 401 aaKnown RBP7.17□□□□□ -1.26
SSBP3-215ENST00000533946 ZNF57Q68EA5 555 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-215ENST00000533946 OR51S1Q8NGJ8 323 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 OR4A16Q8NH70 328 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 TERB2Q8NHR7 220 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 VN1R17PQ8TDU5 208 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 SMIM4Q8WVI0 70 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 TMEM190Q8WZ59 177 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 PINX1Q96BK5 328 aaKnown RBP7.17□□□□□ -1.26
SSBP3-215ENST00000533946 DIRAS2Q96HU8 199 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 PRNDQ9UKY0 176 aa7.17□□□□□ -1.26
SSBP3-215ENST00000533946 IGKV3-7A0A075B6H7 116 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 A0A1B0GU03 582 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 IFNA6P05013 189 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 RNASE2P10153 161 aaKnown RBP7.16□□□□□ -1.26
SSBP3-215ENST00000533946 UCP1P25874 307 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 IL18Q14116 193 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 ODF3L2Q3SX64 289 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 FAM106AQ4KMX7 169 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 Q56UQ5 140 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 FAM209BQ5JX69 171 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 GTSCR1Q86UQ5 136 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 SELENOHQ8IZQ5 122 aaKnown RBP7.16□□□□□ -1.26
SSBP3-215ENST00000533946 FAM24BQ8N5W8 94 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 AP3S1Q92572 193 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 GPR146Q96CH1 333 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 CXorf58Q96LI9 332 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 RNF2Q99496 336 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 SRSF8Q9BRL6 282 aaKnown RBP7.16□□□□□ -1.26
SSBP3-215ENST00000533946 AIFM2Q9BRQ8 373 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 C6orf62Q9GZU0 229 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms