RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 ZP1P60852 638 aa9.44□□□□□ -0.9
AMBRA1-211ENST00000533727 ERASQ7Z444 233 aa9.44□□□□□ -0.9
AMBRA1-211ENST00000533727 NABP1Q96AH0 204 aa9.44□□□□□ -0.9
AMBRA1-211ENST00000533727 CMC4P56277 68 aaPredicted RBP9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 EFNB1P98172 346 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 TNFRSF9Q07011 255 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 IBA57Q5T440 356 aaKnown RBP9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 M0R3E3 92 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 ARTNQ5T4W7 220 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 SELENOHQ8IZQ5 122 aaKnown RBP9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 WDR81Q562E7 1941 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 PTPRDP23468 1912 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 WNT5AP41221 380 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 TMEM177Q53S58 311 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 PXMP4Q9Y6I8 212 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 IGHV3-21A0A0B4J1V1 117 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 SRIP30626 198 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 TAF15Q92804 592 aaKnown RBP eCLIP9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 GPR146Q96CH1 333 aa9.43□□□□□ -0.9
AMBRA1-211ENST00000533727 TRAV40A0A0B4J280 105 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 GRIFINA4D1Z8 144 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 SRD5A1P18405 259 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 TFPI2P48307 235 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 DLX6P56179 175 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 UNC119Q13432 240 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 PMCHL2Q9BQD1 86 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 DPRXA6NFQ7 191 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 IGFBP3P17936 291 aaPredicted RBP9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 SAPCD1Q5SSQ6 148 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 SPSB4Q96A44 273 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 SMIM8Q96KF7 97 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 RNF5Q99942 180 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 MRPL32Q9BYC8 188 aaKnown RBP9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 SH3BGRL3Q9H299 93 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 FBXL15Q9H469 300 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 FBXL7Q9UJT9 491 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 MOB4Q9Y3A3 225 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 INTS1Q8N201 2190 aaKnown RBP9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 TRBV9A0A0B4J1U6 114 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 PRR30Q53SZ7 412 aaPredicted RBP9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 TBL2Q9Y4P3 447 aaKnown RBP9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 SCN2AQ99250 2005 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 ICE1Q9Y2F5 2266 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 CEACAM4O75871 244 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 COX6CP09669 75 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 FHITP49789 147 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 FOXL2NBQ6ZUU3 175 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 ATOH7Q8N100 152 aa9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 BEX4Q9NWD9 120 aaPredicted RBP9.42□□□□□ -0.9
AMBRA1-211ENST00000533727 RBFOX2O43251 390 aaKnown RBP eCLIP9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 IGKV3-15P01624 115 aa9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 RPS11P62280 158 aaKnown RBP eCLIP9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 ALKBH7Q9BT30 221 aaPredicted RBP9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 KLF2Q9Y5W3 355 aaPredicted RBP9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 TMEM250H0YL14 139 aa9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 TEX45Q8NA69 505 aa9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 TMEM70Q9BUB7 260 aa9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 C21orf62Q9NYP8 219 aa9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 WISP1O95388 367 aa9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 OTX1P32242 354 aaPredicted RBP9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 ZNF506Q5JVG8 444 aa9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 Q5PR19 223 aa9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 MRPL20Q9BYC9 149 aaKnown RBP9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 DKK4Q9UBT3 224 aa9.41□□□□□ -0.9
AMBRA1-211ENST00000533727 AMY1AP04745 511 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 KIAA1644Q3SXP7 199 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 IGFL2Q6UWQ7 119 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 SDK2Q58EX2 2172 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 LOC389332A0A1B0GUA5 103 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 AREGP15514 252 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 CCL3L1P16619 93 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 RPL39P5Q59GN2 51 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 DNLZQ5SXM8 178 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 ZNF818PQ6ZRF7 136 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 TMEM136Q6ZRR5 245 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 RNASEH2CQ8TDP1 164 aaKnown RBP9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 C5orf66Q9H5L9 145 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 LYNX1G3V0Z9 82 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 LYNX1P0DP58 116 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 FCGR2BP31994 310 aaPredicted RBP9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 ADIPOQQ15848 244 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 ZNF497Q6ZNH5 498 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 GBGT1Q8N5D6 347 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 OR51G1Q8NGK1 321 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 OR1N2Q8NGR9 330 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 LTBP2Q14767 1821 aa9.4□□□□□ -0.9
AMBRA1-211ENST00000533727 MUC6Q6W4X9 2439 aa9.4□□□□□ -0.91
AMBRA1-211ENST00000533727 J3QLI3 93 aa9.4□□□□□ -0.91
AMBRA1-211ENST00000533727 HTN1P15515 57 aa9.4□□□□□ -0.91
AMBRA1-211ENST00000533727 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.91
AMBRA1-211ENST00000533727 HEPN1Q6WQI6 88 aa9.4□□□□□ -0.91
AMBRA1-211ENST00000533727 GATAD1Q8WUU5 269 aa9.4□□□□□ -0.91
AMBRA1-211ENST00000533727 SLX1AQ9BQ83 275 aa9.4□□□□□ -0.91
AMBRA1-211ENST00000533727 DOCK8Q8NF50 2099 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 TCRBV4S1A1TA0A5B7 111 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 LILRA1O75019 489 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 SRSF7Q16629 238 aaKnown RBP eCLIP9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 ZNF502Q8TBZ5 544 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 SFRP2Q96HF1 295 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 HIST1H4GQ99525 98 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms