RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RELQ04864 619 aaPredicted RBP14.66□□□□□ -0.06
PHRF1-205ENST00000533464 RTN4RL2Q86UN3 420 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 IGHV3-23P01764 117 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 MIR17HGQ75NE6 70 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 CCL19Q99731 98 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 FOXA2Q9Y261 457 aaPredicted RBP14.66□□□□□ -0.06
PHRF1-205ENST00000533464 UPK2O00526 184 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 ANOS1P23352 680 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 RAB9AP51151 201 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 B3GALT5-AS1P59052 145 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 OR4B1Q8NGF8 309 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 ZFP30Q9Y2G7 519 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 DUTP33316 252 aaKnown RBP14.65□□□□□ -0.06
PHRF1-205ENST00000533464 SRSF9Q13242 221 aaKnown RBP eCLIP14.65□□□□□ -0.06
PHRF1-205ENST00000533464 RNASE6Q93091 150 aaKnown RBP14.65□□□□□ -0.06
PHRF1-205ENST00000533464 EEF1AKMT3Q96AZ1 226 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 GBF1Q92538 1859 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 NMUP48645 174 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 CX3CL1P78423 397 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 PLSCR4Q9NRQ2 329 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 RAXQ9Y2V3 346 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 LYNX1G3V0Z9 82 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 PSPNO60542 156 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 LYNX1P0DP58 116 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 TMEM144Q7Z5S9 345 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 WFDC1Q9HC57 220 aa14.65□□□□□ -0.06
PHRF1-205ENST00000533464 FGF16O43320 207 aa14.64□□□□□ -0.07
PHRF1-205ENST00000533464 IGHV1-46P01743 117 aa14.64□□□□□ -0.07
PHRF1-205ENST00000533464 RNFT1Q5M7Z0 435 aa14.64□□□□□ -0.07
PHRF1-205ENST00000533464 SDF2L1Q9HCN8 221 aa14.64□□□□□ -0.07
PHRF1-205ENST00000533464 IGHV3-49A0A0A0MS15 119 aa14.64□□□□□ -0.07
PHRF1-205ENST00000533464 SPACA3Q8IXA5 215 aa14.64□□□□□ -0.07
PHRF1-205ENST00000533464 HEATR1Q9H583 2144 aaKnown RBP14.64□□□□□ -0.07
PHRF1-205ENST00000533464 C15orf61A6NNL5 157 aa14.64□□□□□ -0.07
PHRF1-205ENST00000533464 ZNF25P17030 456 aaPredicted RBP14.64□□□□□ -0.07
PHRF1-205ENST00000533464 RPS20P60866 119 aaKnown RBP14.64□□□□□ -0.07
PHRF1-205ENST00000533464 RNASEH2CQ8TDP1 164 aaKnown RBP14.64□□□□□ -0.07
PHRF1-205ENST00000533464 CBY1Q9Y3M2 126 aa14.64□□□□□ -0.07
PHRF1-205ENST00000533464 TSC2P49815 1807 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 SELLP14151 372 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 C2orf83Q53S99 150 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 MDS2Q8NDY4 140 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 OR52E5Q8NH55 327 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 SRRM5B3KS81 715 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 RBFOX2O43251 390 aaKnown RBP eCLIP14.63□□□□□ -0.072e-6■■■□□ 17.5
PHRF1-205ENST00000533464 OTX1P32242 354 aaPredicted RBP14.63□□□□□ -0.07
PHRF1-205ENST00000533464 QRFPP83859 136 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 RPLP1P05386 114 aaKnown RBP14.63□□□□□ -0.07
PHRF1-205ENST00000533464 CDKN1AP38936 164 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 AP5S1Q9NUS5 200 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 FBXL7Q9UJT9 491 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 PHLDA3Q9Y5J5 127 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 MGAMO43451 1857 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 TRBV9A0A0B4J1U6 114 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 TMEM42Q69YG0 159 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 C21orf62Q9NYP8 219 aa14.63□□□□□ -0.07
PHRF1-205ENST00000533464 SNCGO76070 127 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 NAPSAO96009 420 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 C5orf24Q7Z6I8 188 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 ELOVL1Q9BW60 279 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 IGHV3OR16-8A0A075B7F1 116 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 FOXI3A8MTJ6 420 aaPredicted RBP14.62□□□□□ -0.07
PHRF1-205ENST00000533464 LILRA1O75019 489 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 TRGV3P03979 118 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 TIMP3P35625 211 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 SPATA45Q537H7 98 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 OR4C46A6NHA9 309 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 PEX7O00628 323 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 OR9G9P0C7N8 305 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 CCL20P78556 96 aa14.62□□□□□ -0.07
PHRF1-205ENST00000533464 MBNL2Q5VZF2 373 aaKnown RBP14.62□□□□□ -0.07
PHRF1-205ENST00000533464 FOXA3P55318 350 aaPredicted RBP14.61□□□□□ -0.07
PHRF1-205ENST00000533464 DLX1P56177 255 aa14.61□□□□□ -0.07
PHRF1-205ENST00000533464 PMCHL1Q16048 86 aa14.61□□□□□ -0.07
PHRF1-205ENST00000533464 SRSF7Q16629 238 aaKnown RBP eCLIP14.61□□□□□ -0.07
PHRF1-205ENST00000533464 TMEM133Q9H2Q1 129 aa14.61□□□□□ -0.07
PHRF1-205ENST00000533464 ZNF581Q9P0T4 197 aa14.61□□□□□ -0.07
PHRF1-205ENST00000533464 A6NDN8 102 aa14.61□□□□□ -0.07
PHRF1-205ENST00000533464 LBHQ53QV2 105 aaPredicted RBP14.61□□□□□ -0.07
PHRF1-205ENST00000533464 WNT10AQ9GZT5 417 aa14.61□□□□□ -0.07
PHRF1-205ENST00000533464 GPX1P07203 203 aa14.61□□□□□ -0.07
PHRF1-205ENST00000533464 SAPCD1Q5SSQ6 148 aa14.61□□□□□ -0.07
PHRF1-205ENST00000533464 SRSF6Q13247 344 aaKnown RBP14.61□□□□□ -0.07
PHRF1-205ENST00000533464 USF3Q68DE3 2245 aa14.61□□□□□ -0.07
PHRF1-205ENST00000533464 E9PLN8 166 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 DLX6P56179 175 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 ARPC1AQ92747 370 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 VKORC1Q9BQB6 163 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 IL36BQ9NZH7 164 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 ZNF207O43670 478 aaKnown RBP14.6□□□□□ -0.07
PHRF1-205ENST00000533464 NLRC5Q86WI3 1866 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 A0A087WWC5 75 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 IGHV3-66A0A0C4DH42 116 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 SIAH2O43255 324 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 HBBP68871 147 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 ZNF502Q8TBZ5 544 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 MAP1LC3AQ9H492 121 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 DCAF16Q9NXF7 216 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 CADP27708 2225 aa14.6□□□□□ -0.07
PHRF1-205ENST00000533464 PSMB2P49721 201 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms