RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PAM16Q9Y3D7 125 aa13.61□□□□□ -0.23
CTSB-228ENST00000533455 HEATR1Q9H583 2144 aaKnown RBP13.6□□□□□ -0.23
CTSB-228ENST00000533455 AHRRA9YTQ3 701 aa13.6□□□□□ -0.23
CTSB-228ENST00000533455 MYOD1P15172 320 aa13.6□□□□□ -0.23
CTSB-228ENST00000533455 HES3Q5TGS1 186 aa13.6□□□□□ -0.23
CTSB-228ENST00000533455 MOGAT3Q86VF5 341 aa13.6□□□□□ -0.23
CTSB-228ENST00000533455 KCNS1Q96KK3 526 aa13.6□□□□□ -0.23
CTSB-228ENST00000533455 OR2V2Q96R30 315 aa13.6□□□□□ -0.23
CTSB-228ENST00000533455 PLEKHA3Q9HB20 300 aa13.6□□□□□ -0.23
CTSB-228ENST00000533455 ZNF71Q9NQZ8 489 aaPredicted RBP13.6□□□□□ -0.23
CTSB-228ENST00000533455 RNF114Q9Y508 228 aa13.6□□□□□ -0.23
CTSB-228ENST00000533455 A0A1W2PRE2 83 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 GGTLC3B5MD39 225 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 UPK2O00526 184 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 DLEU1O43261 78 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 IGLV2-8P01709 118 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 AMY1AP04745 511 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 TAS2R45P59539 299 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 SPRNQ5BIV9 151 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 DHRS13Q6UX07 377 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 BHLHA15Q7RTS1 189 aaPredicted RBP13.59□□□□□ -0.23
CTSB-228ENST00000533455 DOLPP1Q86YN1 238 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 FAM222BQ8WU58 562 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 IGF2BP2-AS1Q96M15 143 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 RNF2Q99496 336 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 SLC25A15Q9Y619 301 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 DSCAMO60469 2012 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 IGKV1OR2-108A0A075B7D4 117 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 SMIM27A0A1W2PRY6 76 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 J3QR06 171 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 C2orf83Q53S99 150 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 SARAFQ96BY9 339 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 TMEM208Q9BTX3 173 aa13.59□□□□□ -0.23
CTSB-228ENST00000533455 RNASE7Q9H1E1 156 aaKnown RBP13.59□□□□□ -0.23
CTSB-228ENST00000533455 CDX4O14627 284 aaPredicted RBP13.58□□□□□ -0.24
CTSB-228ENST00000533455 MMP23AO75900 390 aa13.58□□□□□ -0.24
CTSB-228ENST00000533455 HLA-DQA1P01909 254 aa13.58□□□□□ -0.24
CTSB-228ENST00000533455 CRYABP02511 175 aaKnown RBP13.58□□□□□ -0.24
CTSB-228ENST00000533455 REG1AP05451 166 aa13.58□□□□□ -0.24
CTSB-228ENST00000533455 PPOXP50336 477 aa13.58□□□□□ -0.24
CTSB-228ENST00000533455 LYG1Q8N1E2 194 aa13.58□□□□□ -0.24
CTSB-228ENST00000533455 HINT2Q9BX68 163 aa13.58□□□□□ -0.24
CTSB-228ENST00000533455 PROCRQ9UNN8 238 aa13.58□□□□□ -0.24
CTSB-228ENST00000533455 TBL2Q9Y4P3 447 aaKnown RBP13.58□□□□□ -0.24
CTSB-228ENST00000533455 CTRLP40313 264 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 OR1L8Q8NGR8 309 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 FAM122AQ96E09 287 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 MRPL32Q9BYC8 188 aaKnown RBP13.57□□□□□ -0.24
CTSB-228ENST00000533455 NRN1Q9NPD7 142 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 DKK4Q9UBT3 224 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 KNTC1P50748 2209 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 DIRC3C9JPN6 131 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 OR7C2O60412 319 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 BTF3P20290 206 aaKnown RBP13.57□□□□□ -0.24
CTSB-228ENST00000533455 FXYD3Q14802 87 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 TMEM30BQ3MIR4 351 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 PLA2G2CQ5R387 149 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 LINC00574Q9H8X3 128 aa13.57□□□□□ -0.24
CTSB-228ENST00000533455 RAI1Q7Z5J4 1906 aaPredicted RBP13.57□□□□□ -0.24
CTSB-228ENST00000533455 A0A1W2PS18 150 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 BMPR1BO00238 502 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 C8orf88P0DMB2 117 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 KRTDAPP60985 99 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 IBA57Q5T440 356 aaKnown RBP13.56□□□□□ -0.24
CTSB-228ENST00000533455 MOB3BQ86TA1 216 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 ITLN1Q8WWA0 313 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 STARD4Q96DR4 205 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 COMMD5Q9GZQ3 224 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 LPAR2Q9HBW0 351 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 INTS1Q8N201 2190 aaKnown RBP13.56□□□□□ -0.24
CTSB-228ENST00000533455 TTC28Q96AY4 2481 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 A6NNC1 897 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 ZNF253O75346 499 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 RNASE2P10153 161 aaKnown RBP13.56□□□□□ -0.24
CTSB-228ENST00000533455 GATA4P43694 442 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 AMTP48728 403 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 IGFL2Q6UWQ7 119 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 RCHY1Q96PM5 261 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 SLC25A33Q9BSK2 321 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 FAM103A1Q9BTL3 118 aaKnown RBP13.56□□□□□ -0.24
CTSB-228ENST00000533455 BET1LQ9NYM9 111 aa13.56□□□□□ -0.24
CTSB-228ENST00000533455 FRYQ5TBA9 3013 aa13.55□□□□□ -0.24
CTSB-228ENST00000533455 TEX50A0A1B0GTY4 177 aa13.55□□□□□ -0.24
CTSB-228ENST00000533455 IZUMO1RA6ND01 250 aa13.55□□□□□ -0.24
CTSB-228ENST00000533455 ZNF324O75467 553 aaPredicted RBP13.55□□□□□ -0.24
CTSB-228ENST00000533455 ZNF83P51522 516 aa13.55□□□□□ -0.24
CTSB-228ENST00000533455 KLF3P57682 345 aaPredicted RBP13.55□□□□□ -0.24
CTSB-228ENST00000533455 CD69Q07108 199 aa13.55□□□□□ -0.24
CTSB-228ENST00000533455 STUMQ69YW2 141 aa13.55□□□□□ -0.24
CTSB-228ENST00000533455 OR5B3Q8NH48 314 aa13.55□□□□□ -0.24
CTSB-228ENST00000533455 SLC35D1Q9NTN3 355 aa13.55□□□□□ -0.24
CTSB-228ENST00000533455 CDC42EP3Q9UKI2 254 aa13.55□□□□□ -0.24
CTSB-228ENST00000533455 GOLT1BQ9Y3E0 138 aa13.55□□□□□ -0.24
CTSB-228ENST00000533455 PSMB11A5LHX3 300 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 SPINK4O60575 86 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 CT45A6P0DMU7 189 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 CT45A5P0DMU8 189 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 CT45A7P0DMV0 189 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 GATA2P23769 480 aaPredicted RBP13.54□□□□□ -0.24
CTSB-228ENST00000533455 SRIP30626 198 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms