RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 IL22RA2Q969J5 263 aa7.5□□□□□ -1.21
NUP98-220ENST00000533346 TMEM222Q9H0R3 208 aa7.5□□□□□ -1.21
NUP98-220ENST00000533346 C14orf166Q9Y224 244 aaKnown RBP7.5□□□□□ -1.21
NUP98-220ENST00000533346 TMEM56-RWDD3S4R434 201 aa7.5□□□□□ -1.21
NUP98-220ENST00000533346 PIGBOS1A0A0B4J2F0 54 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 CCDC160A6NGH7 325 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 A8MWP6 167 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 HLA-AP01891 365 aaKnown RBP7.49□□□□□ -1.21
NUP98-220ENST00000533346 OR13C7P0DN81 318 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 PI3P19957 117 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 FAUP35544 74 aaKnown RBP7.49□□□□□ -1.21
NUP98-220ENST00000533346 PPP5CP53041 499 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 ELLP55199 621 aaPredicted RBP7.49□□□□□ -1.21
NUP98-220ENST00000533346 SYNJ2BPP57105 145 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 AP3S2P59780 193 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 DEFA5Q01523 94 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 FAAP20Q6NZ36 180 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 LINC00299Q6ZSB3 139 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 OR51S1Q8NGJ8 323 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 OR52E5Q8NH55 327 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 OR4A16Q8NH70 328 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 NAA60Q9H7X0 242 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 CACFD1Q9UGQ2 172 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 NSG2Q9Y328 171 aa7.49□□□□□ -1.21
NUP98-220ENST00000533346 A0A0B4J293 547 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 REG1AP05451 166 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 OR5AC1P0C628 307 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 NHLRC4P0CG21 123 aaPredicted RBP7.48□□□□□ -1.21
NUP98-220ENST00000533346 C8orf88P0DMB2 117 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 GP9P14770 177 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 SPNP16150 400 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 MFAP2P55001 183 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 C19orf35Q6ZS72 473 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 Q8N402 240 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 TOMM5Q8N4H5 51 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 RBPMSQ93062 196 aaKnown RBP7.48□□□□□ -1.21
NUP98-220ENST00000533346 TMEM230Q96A57 120 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 TXN2Q99757 166 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 SLC25A21Q9BQT8 299 aaPredicted RBP7.48□□□□□ -1.21
NUP98-220ENST00000533346 ZNF436Q9C0F3 470 aaPredicted RBP7.48□□□□□ -1.21
NUP98-220ENST00000533346 SRRQ9GZT4 340 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 GAR1Q9NY12 217 aaKnown RBP7.48□□□□□ -1.21
NUP98-220ENST00000533346 TECRQ9NZ01 308 aaKnown RBP7.48□□□□□ -1.21
NUP98-220ENST00000533346 KCNIP3Q9Y2W7 256 aa7.48□□□□□ -1.21
NUP98-220ENST00000533346 MFSD2BA6NFX1 497 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 F8W735 103 aaPredicted RBP7.47□□□□□ -1.21
NUP98-220ENST00000533346 K7EIM0 57 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 CLEC3BP05452 202 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 ARL3P36405 182 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 ERHP84090 104 aaKnown RBP7.47□□□□□ -1.21
NUP98-220ENST00000533346 TMEM187Q14656 261 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 BSXQ3C1V8 233 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 FAM106AQ4KMX7 169 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 DEFB121Q5J5C9 76 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 SPANXN2Q5MJ10 180 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 SLC25A24Q6NUK1 477 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 SPSB3Q6PJ21 355 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 CLEC19AQ6UXS0 136 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 ADAMTSL5Q6ZMM2 481 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 SGPP2Q8IWX5 399 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 SELENOHQ8IZQ5 122 aaKnown RBP7.47□□□□□ -1.21
NUP98-220ENST00000533346 Q8N1Y9 231 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 LHFPL5Q8TAF8 219 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 SCARB1Q8WTV0 552 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 RRNAD1Q96FB5 475 aaKnown RBP7.47□□□□□ -1.21
NUP98-220ENST00000533346 BSCL2Q96G97 398 aaPredicted RBP7.47□□□□□ -1.21
NUP98-220ENST00000533346 ZC4H2Q9NQZ6 224 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 SMAD5-AS1Q9Y6J3 95 aa7.47□□□□□ -1.21
NUP98-220ENST00000533346 A0A0G2JRQ6 117 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 DUXBA0A1W2PPF3 345 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 NAP1L6A6NFF2 107 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 C2orf70A6NJV1 201 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 PPP5D1E7EU14 171 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 I3L2K1 104 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 CORTO00230 105 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 TGOLN2O43493 480 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 OR2C1O95371 312 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 AKR1C2P52895 323 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 SUPT4H1P63272 117 aaKnown RBP7.46□□□□□ -1.22
NUP98-220ENST00000533346 TRIM16LQ309B1 348 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 SP6Q3SY56 376 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 PYDC2Q56P42 97 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 LCN12Q6JVE5 192 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 Q6ZRM9 215 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 LRTM2Q8N967 370 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 MARC2Q969Z3 335 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 PRR25Q96S07 402 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 PLEKHA3Q9HB20 300 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.46□□□□□ -1.22
NUP98-220ENST00000533346 C21orf62Q9NYP8 219 aa7.46□□□□□ -1.22
NUP98-220ENST00000533346 A0A0B4J2A0 478 aa7.45□□□□□ -1.22
NUP98-220ENST00000533346 TMEM213A2RRL7 107 aa7.45□□□□□ -1.22
NUP98-220ENST00000533346 K7EMT4 169 aa7.45□□□□□ -1.22
NUP98-220ENST00000533346 NDUFA4O00483 81 aa7.45□□□□□ -1.22
NUP98-220ENST00000533346 ST8SIA3O43173 380 aa7.45□□□□□ -1.22
NUP98-220ENST00000533346 CBLN1P23435 193 aa7.45□□□□□ -1.22
NUP98-220ENST00000533346 SPCS3P61009 180 aa7.45□□□□□ -1.22
NUP98-220ENST00000533346 SRPXP78539 464 aa7.45□□□□□ -1.22
NUP98-220ENST00000533346 DEFB114Q30KQ6 69 aa7.45□□□□□ -1.22
NUP98-220ENST00000533346 TMEM128Q5BJH2 165 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms