RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 MFAP2P55001 183 aa17.62■□□□□ 0.41
SMPD1-209ENST00000533196 LHFPL1Q86WI0 220 aa17.62■□□□□ 0.41
SMPD1-209ENST00000533196 DEFB125Q8N687 156 aa17.62■□□□□ 0.41
SMPD1-209ENST00000533196 SCARB1Q8WTV0 552 aa17.62■□□□□ 0.41
SMPD1-209ENST00000533196 TMEM190Q8WZ59 177 aa17.62■□□□□ 0.41
SMPD1-209ENST00000533196 GAR1Q9NY12 217 aaKnown RBP17.62■□□□□ 0.41
SMPD1-209ENST00000533196 M0QYG6 137 aa17.61■□□□□ 0.41
SMPD1-209ENST00000533196 NDUFA4O00483 81 aa17.61■□□□□ 0.41
SMPD1-209ENST00000533196 IGKV1-39P01597 117 aa17.61■□□□□ 0.41
SMPD1-209ENST00000533196 IGKV1D-39P04432 117 aa17.61■□□□□ 0.41
SMPD1-209ENST00000533196 GPR141Q7Z602 305 aa17.61■□□□□ 0.41
SMPD1-209ENST00000533196 OR52I2Q8NH67 350 aa17.61■□□□□ 0.41
SMPD1-209ENST00000533196 SRD5A3Q9H8P0 318 aa17.61■□□□□ 0.41
SMPD1-209ENST00000533196 DYNC2H1Q8NCM8 4307 aaKnown RBP17.61■□□□□ 0.41
SMPD1-209ENST00000533196 OR2T8A6NH00 312 aa17.6■□□□□ 0.41
SMPD1-209ENST00000533196 DBX1A6NMT0 343 aa17.6■□□□□ 0.41
SMPD1-209ENST00000533196 PRCDQ00LT1 54 aa17.6■□□□□ 0.41
SMPD1-209ENST00000533196 BTNL8Q6UX41 500 aa17.6■□□□□ 0.41
SMPD1-209ENST00000533196 RBPMS2Q6ZRY4 209 aaKnown RBP17.6■□□□□ 0.41
SMPD1-209ENST00000533196 OR2C3Q8N628 320 aa17.6■□□□□ 0.41
SMPD1-209ENST00000533196 ZNF114Q8NC26 417 aa17.6■□□□□ 0.41
SMPD1-209ENST00000533196 OR52B4Q8NGK2 314 aa17.6■□□□□ 0.41
SMPD1-209ENST00000533196 C5orf66Q9H5L9 145 aa17.6■□□□□ 0.41
SMPD1-209ENST00000533196 DAZ1Q9NQZ3 744 aaKnown RBP17.6■□□□□ 0.41
SMPD1-209ENST00000533196 K7EIM0 57 aa17.59■□□□□ 0.41
SMPD1-209ENST00000533196 ATG12O94817 140 aa17.59■□□□□ 0.41
SMPD1-209ENST00000533196 CD3DP04234 171 aa17.59■□□□□ 0.41
SMPD1-209ENST00000533196 PGAM2P15259 253 aa17.59■□□□□ 0.41
SMPD1-209ENST00000533196 ALDH3B2P48448 385 aa17.59■□□□□ 0.41
SMPD1-209ENST00000533196 HSPE1P61604 102 aaKnown RBP17.59■□□□□ 0.41
SMPD1-209ENST00000533196 MRPS10P82664 201 aaKnown RBP17.59■□□□□ 0.41
SMPD1-209ENST00000533196 SSBP1Q04837 148 aaKnown RBP17.59■□□□□ 0.41
SMPD1-209ENST00000533196 TMEM229BQ8NBD8 167 aa17.59■□□□□ 0.41
SMPD1-209ENST00000533196 ABHD1Q96SE0 405 aa17.59■□□□□ 0.41
SMPD1-209ENST00000533196 HIPK2Q9H2X6 1198 aa17.59■□□□□ 0.41
SMPD1-209ENST00000533196 IGHV3-35A0A0C4DH35 117 aa17.58■□□□□ 0.4
SMPD1-209ENST00000533196 RBMY1BA6NDE4 496 aaKnown RBP17.58■□□□□ 0.4
SMPD1-209ENST00000533196 RBMY1EA6NEQ0 496 aaKnown RBP17.58■□□□□ 0.4
SMPD1-209ENST00000533196 K7EMT4 169 aa17.58■□□□□ 0.4
SMPD1-209ENST00000533196 CD74P04233 296 aa17.58■□□□□ 0.4
SMPD1-209ENST00000533196 RBMY1DP0C7P1 496 aaKnown RBP17.58■□□□□ 0.4
SMPD1-209ENST00000533196 FCGR2BP31994 310 aaPredicted RBP17.58■□□□□ 0.4
SMPD1-209ENST00000533196 PIGPP57054 158 aa17.58■□□□□ 0.4
SMPD1-209ENST00000533196 TAS2R19P59542 299 aa17.58■□□□□ 0.4
SMPD1-209ENST00000533196 RNASE12Q5GAN4 147 aaKnown RBP17.58■□□□□ 0.4
SMPD1-209ENST00000533196 MRGPRFQ96AM1 343 aa17.58■□□□□ 0.4
SMPD1-209ENST00000533196 F8W735 103 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-209ENST00000533196 Q56UQ5 140 aa17.57■□□□□ 0.4
SMPD1-209ENST00000533196 TERB2Q8NHR7 220 aa17.57■□□□□ 0.4
SMPD1-209ENST00000533196 ZFAND1Q8TCF1 268 aa17.57■□□□□ 0.4
SMPD1-209ENST00000533196 TXN2Q99757 166 aa17.57■□□□□ 0.4
SMPD1-209ENST00000533196 SPAG8Q99932 426 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-209ENST00000533196 WFDC10AQ9H1F0 79 aa17.57■□□□□ 0.4
SMPD1-209ENST00000533196 RABL2AQ9UBK7 228 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-209ENST00000533196 RABL2BQ9UNT1 228 aa17.57■□□□□ 0.4
SMPD1-209ENST00000533196 GABARAPH6UMI1 98 aa17.56■□□□□ 0.4
SMPD1-209ENST00000533196 B3GALNT1O75752 331 aa17.56■□□□□ 0.4
SMPD1-209ENST00000533196 SCAF4O95104 1147 aaKnown RBP17.56■□□□□ 0.4
SMPD1-209ENST00000533196 ERHP84090 104 aaKnown RBP17.56■□□□□ 0.4
SMPD1-209ENST00000533196 LAMTOR1Q6IAA8 161 aa17.56■□□□□ 0.4
SMPD1-209ENST00000533196 CCDC71LQ8N9Z2 235 aa17.56■□□□□ 0.4
SMPD1-209ENST00000533196 CHRDL1Q9BU40 450 aa17.56■□□□□ 0.4
SMPD1-209ENST00000533196 IGHV3-21A0A0B4J1V1 117 aa17.55■□□□□ 0.4
SMPD1-209ENST00000533196 TSPAN4O14817 238 aa17.55■□□□□ 0.4
SMPD1-209ENST00000533196 ADMP35318 185 aa17.55■□□□□ 0.4
SMPD1-209ENST00000533196 RELQ04864 619 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-209ENST00000533196 UBAC2Q8NBM4 344 aa17.55■□□□□ 0.4
SMPD1-209ENST00000533196 BCL7BQ9BQE9 202 aa17.55■□□□□ 0.4
SMPD1-209ENST00000533196 MIXL1Q9H2W2 232 aa17.55■□□□□ 0.4
SMPD1-209ENST00000533196 COPZ2Q9P299 210 aa17.55■□□□□ 0.4
SMPD1-209ENST00000533196 C3orf85A0A1B0GTC6 90 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 C15orf62A8K5M9 175 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 INS-IGF2F8WCM5 200 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 I3L2K1 104 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 RGS5O15539 181 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 RAB3DO95716 219 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 CTSGP08311 255 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 PI3P19957 117 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 MFAP4P55083 255 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 STEAP1BQ6NZ63 245 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 IL17DQ8TAD2 202 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 SELENOKQ9Y6D0 94 aa17.54■□□□□ 0.4
SMPD1-209ENST00000533196 NUPL2O15504 423 aaKnown RBP17.53■□□□□ 0.4
SMPD1-209ENST00000533196 P0C879 139 aa17.53■□□□□ 0.4
SMPD1-209ENST00000533196 AKR1C2P52895 323 aa17.53■□□□□ 0.4
SMPD1-209ENST00000533196 MEF2DQ14814 521 aa17.53■□□□□ 0.4
SMPD1-209ENST00000533196 RAB2BQ8WUD1 216 aa17.53■□□□□ 0.4
SMPD1-209ENST00000533196 MISP3Q96FF7 219 aa17.53■□□□□ 0.4
SMPD1-209ENST00000533196 TP53RKQ96S44 253 aa17.53■□□□□ 0.4
SMPD1-209ENST00000533196 SACSQ9NZJ4 4579 aa17.52■□□□□ 0.4
SMPD1-209ENST00000533196 IGKV1-5P01602 117 aa17.52■□□□□ 0.4
SMPD1-209ENST00000533196 CTSDP07339 412 aaPredicted RBP17.52■□□□□ 0.4
SMPD1-209ENST00000533196 PPP5CP53041 499 aa17.52■□□□□ 0.4
SMPD1-209ENST00000533196 SPCS2Q15005 226 aa17.52■□□□□ 0.4
SMPD1-209ENST00000533196 OR4D10Q8NGI6 311 aa17.52■□□□□ 0.4
SMPD1-209ENST00000533196 C20orf24Q9BUV8 137 aa17.52■□□□□ 0.4
SMPD1-209ENST00000533196 GGTLC1Q9BX51 225 aa17.52■□□□□ 0.4
SMPD1-209ENST00000533196 RETNQ9HD89 108 aa17.52■□□□□ 0.4
SMPD1-209ENST00000533196 STARD9Q9P2P6 4700 aa17.51■□□□□ 0.39
SMPD1-209ENST00000533196 LOC102724200A0A096LPH7 203 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms