RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 HOXA1P49639 335 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 TPPP2P59282 170 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 HSPE1P61604 102 aaKnown RBP10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 FHL3Q13643 280 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 SMCO1Q147U7 214 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 ASPHD1Q5U4P2 390 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 LRTM2Q8N967 370 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 OR10W1Q8NGF6 305 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 ZNF431Q8TF32 576 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 KLK15Q9H2R5 256 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 PLEKHA3Q9HB20 300 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 NDUFA4L2Q9NRX3 87 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 ZNF257Q9Y2Q1 563 aa10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 PRKDCP78527 4128 aaKnown RBP10.05□□□□□ -0.8
TRAPPC4-212ENST00000533058 DNAH3Q8TD57 4116 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 A0A1B0GW64 132 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 CEBPZOSA8MTT3 80 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 I3L521 148 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 SOX15O60248 233 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 PRH1P02810 166 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 PSMB6P28072 239 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 RGS21Q2M5E4 152 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 GGNBP1Q5YKI7 109 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 Q6ZRM9 215 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 ZNF429Q86V71 674 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 C12orf45Q8N5I9 185 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 TTC9CQ8N5M4 171 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 MITD1Q8WV92 249 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 SRSF8Q9BRL6 282 aaKnown RBP10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 ZMAT5Q9UDW3 170 aaKnown RBP10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 TMED3Q9Y3Q3 217 aa10.04□□□□□ -0.8
TRAPPC4-212ENST00000533058 A0A1B0GU03 582 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 C13orf42A0A1B0GVH6 325 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 IGLC7A0M8Q6 106 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 CGB1A6NKQ9 187 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 NPIPB5A8MRT5 1133 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 FAM25EA8MYX2 175 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 H3BUA1 57 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 CYB5BO43169 146 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 PRAF2O60831 178 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 ADAP1O75689 374 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 BRI3O95415 125 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 IL5P05113 134 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 SPCS3P61009 180 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 ERHP84090 104 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 PRCDQ00LT1 54 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 NMSQ5H8A3 153 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 C19orf35Q6ZS72 473 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 HSD17B13Q7Z5P4 300 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 OR5B12Q96R08 314 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 SLA2Q9H6Q3 261 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 AURKAIP1Q9NWT8 199 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 TGP01266 2768 aa10.03□□□□□ -0.8
TRAPPC4-212ENST00000533058 DEFA5Q01523 94 aa10.02□□□□□ -0.81
TRAPPC4-212ENST00000533058 OR11H1Q8NG94 326 aa10.02□□□□□ -0.81
TRAPPC4-212ENST00000533058 DPF1Q92782 380 aa10.02□□□□□ -0.81
TRAPPC4-212ENST00000533058 MARVELD1Q9BSK0 173 aa10.02□□□□□ -0.81
TRAPPC4-212ENST00000533058 CACFD1Q9UGQ2 172 aa10.02□□□□□ -0.81
TRAPPC4-212ENST00000533058 A0A0G2JLM5 398 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 C5orf51A6NDU8 294 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 CCSO14618 274 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 SSNA1O43805 119 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 OR2J3O76001 311 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 IGHV3-11P01762 117 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 PRB2P02812 416 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 OR8U8P0C7N1 319 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 HIST1H1BP16401 226 aaKnown RBP10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 CTRB1P17538 263 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 SNCAP37840 140 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 RHOGP84095 191 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 WT1-ASQ06250 92 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 DEFB136Q30KP8 78 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 CTRB2Q6GPI1 263 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 SLC25A24Q6NUK1 477 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 OR1N2Q8NGR9 330 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 DUX3Q96PT4 197 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 GNB4Q9HAV0 340 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 HEYLQ9NQ87 328 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 GSKIPQ9P0R6 139 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 FBXL7Q9UJT9 491 aa10.01□□□□□ -0.81
TRAPPC4-212ENST00000533058 SCGB1D2O95969 90 aa10□□□□□ -0.81
TRAPPC4-212ENST00000533058 CRYGCP07315 174 aa10□□□□□ -0.81
TRAPPC4-212ENST00000533058 SLC25A6P12236 298 aa10□□□□□ -0.81
TRAPPC4-212ENST00000533058 KRTAP10-11P60412 298 aa10□□□□□ -0.81
TRAPPC4-212ENST00000533058 ATP5G2Q06055 141 aa10□□□□□ -0.81
TRAPPC4-212ENST00000533058 TNFRSF9Q07011 255 aa10□□□□□ -0.81
TRAPPC4-212ENST00000533058 ZNF616Q08AN1 781 aa10□□□□□ -0.81
TRAPPC4-212ENST00000533058 IAH1Q2TAA2 248 aaPredicted RBP10□□□□□ -0.81
TRAPPC4-212ENST00000533058 OR52E5Q8NH55 327 aa10□□□□□ -0.81
TRAPPC4-212ENST00000533058 MRAPQ8TCY5 172 aa10□□□□□ -0.81
TRAPPC4-212ENST00000533058 HIPK2Q9H2X6 1198 aa10□□□□□ -0.81
TRAPPC4-212ENST00000533058 FAM223BA6NKX1 122 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 MPTX1A8MV57 137 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 SNRPGP15A8MWD9 76 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 WRBO00258 174 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 MED6O75586 246 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 LGALS1P09382 135 aaKnown RBP9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 INSL3P51460 131 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 SUB1P53999 127 aaKnown RBP eCLIP9.99□□□□□ -0.811e-9■■■■■ 65.6
TRAPPC4-212ENST00000533058 TATDN3Q17R31 274 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms