RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	COMMD5	Q9GZQ3	224 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	TMEM222	Q9H0R3	208 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	KLK15	Q9H2R5	256 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	ZNF355P	Q9NSJ1	428 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	COA4	Q9NYJ1	87 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	TBC1D24	Q9ULP9	559 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	COL7A1	Q02388	2944 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	TNC	P24821	2201 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678		A0A0G2JRQ6	117 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	CGB1	A6NKQ9	187 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	KRTAP9-7	A8MTY7	169 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678		E7EUB6	86 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	RBMXL2	O75526	392 aa	Known RBP	6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	SFT2D2	O95562	160 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	CDS2	O95674	445 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	REG1A	P05451	166 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	FGF2	P09038	288 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678		P0C879	139 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	ANXA3	P12429	323 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	AREG	P15514	252 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	ASAH1	Q13510	395 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	PPP1R1A	Q13522	171 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	TMEM187	Q14656	261 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	TMEM128	Q5BJH2	165 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	TMEM268	Q5VZI3	342 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	C19orf35	Q6ZS72	473 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	SELENOH	Q8IZQ5	122 aa	Known RBP	6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	SLC35G3	Q8N808	338 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	OR4A16	Q8NH70	328 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	MYOZ3	Q8TDC0	251 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	GLYATL2	Q8WU03	294 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	C4orf3	Q8WVX3	66 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	RBPMS	Q93062	196 aa	Known RBP	6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	GALNT14	Q96FL9	552 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	MS4A10	Q96PG2	267 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	QTRT1	Q9BXR0	403 aa	Known RBP	6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	C20orf85	Q9H1P6	137 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	ZMAT4	Q9H898	229 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	ZFP57	Q9NU63	452 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	PRND	Q9UKY0	176 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	FLVCR2	Q9UPI3	526 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	KCNIP3	Q9Y2W7	256 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	OR51B2	Q9Y5P1	312 aa		6.23	□□□□□ -1.41
PUM1-223	ENST00000532678	TEX50	A0A1B0GTY4	177 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	IGLC7	A0M8Q6	106 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	NPIPB5	A8MRT5	1133 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678		H3BUA1	57 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	HLA-A	P01891	365 aa	Known RBP	6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	PRH1	P02810	166 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	TRGV3	P03979	118 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	ANXA7	P20073	488 aa	Known RBP	6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	RAB9A	P51151	201 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	RAB25	P57735	213 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	SRPX	P78539	464 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	IFITM3	Q01628	133 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	DEFB136	Q30KP8	78 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	THOC7	Q6I9Y2	204 aa	Known RBP	6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	SLC25A42	Q86VD7	318 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	CADM3	Q8N126	398 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	LGI3	Q8N145	548 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	TTC9C	Q8N5M4	171 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	ZNF491	Q8N8L2	437 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	OR1L8	Q8NGR8	309 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	OR5B3	Q8NH48	314 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	IL22RA2	Q969J5	263 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	LSM10	Q969L4	123 aa	Known RBP	6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	RRNAD1	Q96FB5	475 aa	Known RBP	6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	UBE2E2	Q96LR5	201 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	TMEM56	Q96MV1	263 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	OR5B12	Q96R08	314 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	HINT2	Q9BX68	163 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	SLA2	Q9H6Q3	261 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	GNB4	Q9HAV0	340 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	TMEM14B	Q9NUH8	114 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	FKBP11	Q9NYL4	201 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	ZNF257	Q9Y2Q1	563 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	TMEM56-RWDD3	S4R434	201 aa		6.22	□□□□□ -1.41
PUM1-223	ENST00000532678	HUWE1	Q7Z6Z7	4374 aa	Known RBP	6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	TRAV6	A0A075B6T7	132 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678		A0A0B4J293	547 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	IGHV3-11	P01762	117 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	TCRB	P04435	133 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	LGALS1	P09382	135 aa	Known RBP	6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	TRAPPC2	P0DI81	140 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	TRAPPC2B	P0DI82	140 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	CTRB1	P17538	263 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	PSMB6	P28072	239 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	SLC6A1	P30531	599 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	CDX1	P47902	265 aa	Predicted RBP	6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	UBE2M	P61081	183 aa	Known RBP	6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	PRCD	Q00LT1	54 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	WT1-AS	Q06250	92 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	CD69	Q07108	199 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	EGFEM1P	Q0D2K5	195 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	KIAA0141	Q14154	515 aa	Predicted RBP	6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	ANKRD55	Q3KP44	614 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	SPINK9	Q5DT21	86 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	CTRB2	Q6GPI1	263 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	MZT2B	Q6NZ67	158 aa		6.21	□□□□□ -1.42
PUM1-223	ENST00000532678	FAM219A	Q8IW50	185 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms