RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 TRAPPC6BQ86SZ2 158 aa2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 CROCCP2Q86T23 111 aa2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 SMCR5Q8TEV8 140 aa2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 CANT1Q8WVQ1 401 aa2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 SEC22CQ9BRL7 303 aa2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 TPT1P8Q9HAU6 139 aa2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 MCTS1Q9ULC4 181 aaKnown RBP2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 ZNF443Q9Y2A4 671 aaPredicted RBP2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 PLA2R1Q13018 1463 aa2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 PLXNB3Q9ULL4 1909 aa2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 ITGB4P16144 1822 aa2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 CRB1P82279 1406 aa2.68□□□□□ -1.98
AC055878.1-201ENST00000531858 ADAMTSL1Q8N6G6 1762 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 IGKV1D-37A0A075B6S9 117 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 TRAV36DV7A0A075B6V5 113 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 IGKV1D-43A0A0B4J1Z2 117 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 IGKV3D-20A0A0C4DH25 116 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 NDUFA2O43678 99 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 ZNF73O43830 326 aaPredicted RBP2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 GGCTO75223 188 aaKnown RBP2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 BPGMP07738 259 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 INAFM2P0DMQ5 153 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 BCL2P10415 239 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 COL8A2P25067 703 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 SDC4P31431 198 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 AKR1C3P42330 323 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 ZNF80P51504 273 aaPredicted RBP2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 PLCXD2Q0VAA5 305 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 SMIM21Q3B7S5 101 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 ZNF880Q6PDB4 577 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 ST6GALNAC3Q8NDV1 305 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 SLAMF6Q96DU3 332 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 PFDN5Q99471 154 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 TMEM133Q9H2Q1 129 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 ANAPC11Q9NYG5 84 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 CKLFQ9UBR5 152 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 NOTCH4Q99466 2003 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 BCL9O00512 1426 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 KMT2EQ8IZD2 1858 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 NAV1Q8NEY1 1877 aa2.67□□□□□ -1.98
AC055878.1-201ENST00000531858 WDR7Q9Y4E6 1490 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 MED23Q9ULK4 1368 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 IGLV3-16A0A075B6K0 115 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 IGHV3-15A0A0B4J1V0 119 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 TRAV40A0A0B4J280 105 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 TMEM189A5PLL7 270 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 ARRDC5A6NEK1 342 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 TMEM235A6NFC5 223 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 TLCD2A6NGC4 264 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 LEPROTO15243 131 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 UCHL1P09936 223 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 BAMBIQ13145 260 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 LGALSLQ3ZCW2 172 aaPredicted RBP2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 MORN2Q502X0 79 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 LINC00483Q53H64 154 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 NOXRED1Q6NXP6 359 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 SPINT4Q6UDR6 99 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 LRRC28Q86X40 367 aaPredicted RBP2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 Q8N9L7 120 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 OR10P1Q8NGE3 313 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 YPEL2Q96QA6 119 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 SLC39A9Q9NUM3 307 aa2.66□□□□□ -1.98
AC055878.1-201ENST00000531858 A0A1B0GU33 70 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 MEIS3P1A6NDR6 274 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 GGT3PA6NGU5 568 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 TMEM212A6NML5 194 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 TRAPPC2LH3BP13 241 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 BUB1B-PAK6H3BSN5 160 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 CYB5BO43169 146 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 SULT1C4O75897 302 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 IGHV3-7P01780 117 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 NFYAP23511 347 aaPredicted RBP2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 XCL1P47992 114 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 ZNF117Q03924 483 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 OR8B8Q15620 311 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 ZNF141Q15928 474 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 BCL2L15Q5TBC7 163 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 PRR15Q8IV56 129 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 DYNAPQ8N1N2 210 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 RNASE11Q8TAA1 199 aaKnown RBP2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 C1orf54Q8WWF1 131 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 TEX37Q96LM6 180 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 GPX7Q96SL4 187 aaPredicted RBP2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 MIEN1Q9BRT3 115 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 ASF1BQ9NVP2 202 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 COPZ2Q9P299 210 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 TP73-AS1Q9UF72 201 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 PCTPQ9UKL6 214 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 MED31Q9Y3C7 131 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 HEY1Q9Y5J3 304 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 CDC42BPBQ9Y5S2 1711 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 CAMSAP2Q08AD1 1489 aa2.65□□□□□ -1.99
AC055878.1-201ENST00000531858 BAZ2AQ9UIF9 1905 aaKnown RBP2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 A0A0J9YW62 118 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 TRDV1A0A1B0GX56 115 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 H3BPC8 53 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 TAX1BP3O14907 124 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 TRGC2P03986 189 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 MSMBP08118 114 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms