RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 SYS1-DBNDD2H3BUS1 97 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 MGST3O14880 152 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 OR7C2O60412 319 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 FCGR3BO75015 233 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 IGHV3-9P01782 118 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 IGFBP2P18065 325 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 DUSP3P51452 185 aaPredicted RBP9.59□□□□□ -0.87
TRIM3-210ENST00000530724 AESQ08117 197 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 GDF5OSQ5U4N7 250 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 WDR82Q6UXN9 313 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 ABHD12Q8N2K0 398 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 SSMEM1Q8WWF3 244 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 URB1-AS1Q96HZ7 61 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 ZPBPQ9BS86 351 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 NDFIP1Q9BT67 221 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 PRSS22Q9GZN4 317 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 WNT10AQ9GZT5 417 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 TMEM191AQ9H0A3 160 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 CSTL1Q9H114 145 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 SCRT2Q9NQ03 307 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 IDI2-AS1Q9NZ38 188 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 ZNF835Q9Y2P0 537 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 KNL1Q8NG31 2342 aa9.59□□□□□ -0.87
TRIM3-210ENST00000530724 TRBV6-1A0A0K0K1D8 114 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 SRRM4A7MD48 611 aaKnown RBP9.58□□□□□ -0.88
TRIM3-210ENST00000530724 K7ESF4 209 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 M0R1X1 148 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 GDF9O60383 454 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 LIPFP07098 398 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 KIAA1644Q3SXP7 199 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 PSMG4Q5JS54 123 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 LCN12Q6JVE5 192 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 C16orf54Q6UWD8 224 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 Q6ZR03 302 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 FAM19A2Q8N3H0 131 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 C1orf162Q8NEQ5 155 aaPredicted RBP9.58□□□□□ -0.88
TRIM3-210ENST00000530724 NUDT10Q8NFP7 164 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 STXBP6Q8NFX7 210 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 UBALD1Q8TB05 177 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 MLST8Q9BVC4 326 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 ENY2Q9NPA8 101 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 PEF1Q9UBV8 284 aaKnown RBP9.58□□□□□ -0.88
TRIM3-210ENST00000530724 DUSP13Q9UII6 198 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 LOXL2Q9Y4K0 774 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 UNC13CQ8NB66 2214 aa9.58□□□□□ -0.88
TRIM3-210ENST00000530724 OR4C46A6NHA9 309 aa9.57□□□□□ -0.88
TRIM3-210ENST00000530724 M0R296 226 aa9.57□□□□□ -0.88
TRIM3-210ENST00000530724 SSTR5P35346 364 aa9.57□□□□□ -0.88
TRIM3-210ENST00000530724 MFAP2P55001 183 aa9.57□□□□□ -0.88
TRIM3-210ENST00000530724 RPS16P62249 146 aaKnown RBP9.57□□□□□ -0.88
TRIM3-210ENST00000530724 HBBP68871 147 aa9.57□□□□□ -0.88
TRIM3-210ENST00000530724 VAMP3Q15836 100 aa9.57□□□□□ -0.88
TRIM3-210ENST00000530724 SPINK9Q5DT21 86 aa9.57□□□□□ -0.88
TRIM3-210ENST00000530724 PEAR1Q5VY43 1037 aaPredicted RBP9.57□□□□□ -0.88
TRIM3-210ENST00000530724 OR4A47Q6IF82 309 aa9.57□□□□□ -0.88
TRIM3-210ENST00000530724 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
TRIM3-210ENST00000530724 FAM169BQ8N8A8 192 aa9.57□□□□□ -0.88
TRIM3-210ENST00000530724 ZNF784Q8NCA9 323 aaPredicted RBP9.57□□□□□ -0.88
TRIM3-210ENST00000530724 H1FXQ92522 213 aaKnown RBP9.57□□□□□ -0.88
TRIM3-210ENST00000530724 NPFFR1Q9GZQ6 430 aa9.57□□□□□ -0.88
TRIM3-210ENST00000530724 AMMECR1Q9Y4X0 333 aaPredicted RBP9.57□□□□□ -0.88
TRIM3-210ENST00000530724 NPIPB6E9PJ23 425 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 UPK2O00526 184 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 PEX7O00628 323 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 FSTL3O95633 263 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 IGLC1P0CG04 106 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 FOXA3P55318 350 aaPredicted RBP9.56□□□□□ -0.88
TRIM3-210ENST00000530724 PAX2Q02962 417 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 LINC01545Q5VT33 79 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 MBNL2Q5VZF2 373 aaKnown RBP9.56□□□□□ -0.88
TRIM3-210ENST00000530724 PVRIGQ6DKI7 326 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 ZNF329Q86UD4 541 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 THAP8Q8NA92 274 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 OR1L4Q8NGR5 311 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 NUDT11Q96G61 164 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 SLC25A2Q9BXI2 301 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 PLEKHA3Q9HB20 300 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 MED12Q93074 2177 aa9.56□□□□□ -0.88
TRIM3-210ENST00000530724 IGKV1OR2-108A0A075B7D4 117 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 TRAV3A0A0B4J244 114 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 C19orf71A6NCJ1 209 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 SRRM5B3KS81 715 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 NDUFS8O00217 210 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 NBEAP1P0C6P0 100 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 NTF3P20783 257 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 PRDX2P32119 198 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 CD69Q07108 199 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 FXYD3Q14802 87 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 GUSBP1Q15486 140 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 MPV17L2Q567V2 206 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 Q56UQ5 140 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 C9orf135Q5VTT2 229 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 LYSMD4Q5XG99 296 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 CD177Q8N6Q3 437 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 KLF14Q8TD94 323 aaPredicted RBP9.55□□□□□ -0.88
TRIM3-210ENST00000530724 SNRNP40Q96DI7 357 aaKnown RBP9.55□□□□□ -0.88
TRIM3-210ENST00000530724 TTTY12Q9BZ98 90 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 SPRY4Q9C004 299 aa9.55□□□□□ -0.88
TRIM3-210ENST00000530724 HSPB8Q9UJY1 196 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms