RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 IGSF23A1L1A6 192 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 CST7O76096 145 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 IGHG2P01859 326 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 RLN2P04090 185 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 METTL15P1P0C7V9 234 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 PET100P0DJ07 73 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 PVALBP20472 110 aaPredicted RBP8.38□□□□□ -1.07
SOX6-213ENST00000530378 HIST2H2BDQ6DRA6 164 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 OR8G2PQ6IF36 304 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 C10orf99Q6UWK7 81 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 LCNL1Q6ZST4 164 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 Q6ZSV7 163 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 ZNF329Q86UD4 541 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 TMEM217Q8N7C4 229 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 SLC24A4Q8NFF2 622 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 ASB13Q8WXK3 278 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 BSCL2Q96G97 398 aaPredicted RBP8.38□□□□□ -1.07
SOX6-213ENST00000530378 PRSS22Q9GZN4 317 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 C11orf1Q9H5F2 150 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 ZC4H2Q9NQZ6 224 aa8.38□□□□□ -1.07
SOX6-213ENST00000530378 TRAV41A0A0B4J266 112 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 A0A1W2PN81 502 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 E5RGE8 158 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 CLDN34H7C241 214 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 IGHV3-48P01763 117 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 CRYBA1P05813 215 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 CHRNA7P36544 502 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 SNCAP37840 140 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 FGL1Q08830 312 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 PDLIM3Q53GG5 364 aaPredicted RBP8.37□□□□□ -1.07
SOX6-213ENST00000530378 SGMS2Q8NHU3 365 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 PINX1Q96BK5 328 aaKnown RBP8.37□□□□□ -1.07
SOX6-213ENST00000530378 JMJD8Q96S16 334 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 RAB40CQ96S21 281 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 P2RX4Q99571 388 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 SMIM3Q9BZL3 60 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 ZNF355PQ9NSJ1 428 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 S4R3C0 116 aa8.37□□□□□ -1.07
SOX6-213ENST00000530378 C15orf62A8K5M9 175 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 RNASE2P10153 161 aaKnown RBP8.36□□□□□ -1.07
SOX6-213ENST00000530378 DEFA4P12838 97 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 NPY1RP25929 384 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 MFAP2P55001 183 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 RPL23AP62750 156 aaKnown RBP8.36□□□□□ -1.07
SOX6-213ENST00000530378 ERHP84090 104 aaKnown RBP8.36□□□□□ -1.07
SOX6-213ENST00000530378 ZNF546Q86UE3 836 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 OR2C3Q8N628 320 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 MISP3Q96FF7 219 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 MS4A10Q96PG2 267 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 LYRM2Q9NU23 88 aaPredicted RBP8.36□□□□□ -1.07
SOX6-213ENST00000530378 ZFP57Q9NU63 452 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 STRAPQ9Y3F4 350 aaKnown RBP8.36□□□□□ -1.07
SOX6-213ENST00000530378 DMRT1Q9Y5R6 373 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 AP4M1O00189 453 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 SOX15O60248 233 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 FBXO24O75426 580 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 C1QBP02746 253 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 IFNA4P05014 189 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 HNRNPCP07910 306 aaKnown RBP eCLIP8.36□□□□□ -1.07
SOX6-213ENST00000530378 OR8U8P0C7N1 319 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 EIF2B2P49770 351 aaKnown RBP8.36□□□□□ -1.07
SOX6-213ENST00000530378 HAPLN4Q86UW8 402 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 STPG2Q8N412 459 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 SMIM8Q96KF7 97 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 CIB3Q96Q77 187 aaPredicted RBP8.36□□□□□ -1.07
SOX6-213ENST00000530378 WNT10AQ9GZT5 417 aa8.36□□□□□ -1.07
SOX6-213ENST00000530378 RNF222A6NCQ9 220 aa8.35□□□□□ -1.07
SOX6-213ENST00000530378 HKR1P10072 659 aa8.35□□□□□ -1.07
SOX6-213ENST00000530378 SLC25A4P12235 298 aa8.35□□□□□ -1.07
SOX6-213ENST00000530378 RPL12P30050 165 aaKnown RBP8.35□□□□□ -1.07
SOX6-213ENST00000530378 EWSR1Q01844 656 aaKnown RBP eCLIP8.35□□□□□ -1.07
SOX6-213ENST00000530378 NHLH2Q02577 135 aa8.35□□□□□ -1.07
SOX6-213ENST00000530378 ARL16Q0P5N6 197 aa8.35□□□□□ -1.07
SOX6-213ENST00000530378 CLINT1Q14677 625 aa8.35□□□□□ -1.07
SOX6-213ENST00000530378 SLC25A24Q6NUK1 477 aa8.35□□□□□ -1.07
SOX6-213ENST00000530378 NOXA1Q86UR1 476 aa8.35□□□□□ -1.07
SOX6-213ENST00000530378 OR2T6Q8NHC8 308 aa8.35□□□□□ -1.07
SOX6-213ENST00000530378 TNFSF18Q9UNG2 199 aa8.35□□□□□ -1.07
SOX6-213ENST00000530378 TENM1Q9UKZ4 2725 aa8.35□□□□□ -1.07
SOX6-213ENST00000530378 TSC22D2O75157 780 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 OR2J3O76001 311 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 IGHV3-23P01764 117 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 IGF1P05019 195 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 LYL1P12980 280 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 CTRB1P17538 263 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 CXCL2P19875 107 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 HTR2BP41595 481 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 P2RY1P47900 373 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 CTRB2Q6GPI1 263 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 MRPL41Q8IXM3 137 aaKnown RBP8.34□□□□□ -1.07
SOX6-213ENST00000530378 TMEM252Q8N6L7 170 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 INO80EQ8NBZ0 244 aaPredicted RBP8.34□□□□□ -1.07
SOX6-213ENST00000530378 FAM110DQ8TAY7 271 aaPredicted RBP8.34□□□□□ -1.07
SOX6-213ENST00000530378 SERTAD4Q9NUC0 356 aa8.34□□□□□ -1.07
SOX6-213ENST00000530378 F11RQ9Y624 299 aaKnown RBP8.34□□□□□ -1.07
SOX6-213ENST00000530378 NPIPB5A8MRT5 1133 aa8.33□□□□□ -1.08
SOX6-213ENST00000530378 PF4V1P10720 104 aa8.33□□□□□ -1.08
SOX6-213ENST00000530378 NUP62P37198 522 aaPredicted RBP8.33□□□□□ -1.08
SOX6-213ENST00000530378 OPRK1P41145 380 aa8.33□□□□□ -1.08
SOX6-213ENST00000530378 MLANAQ16655 118 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms