RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 RPEL1Q2QD12 228 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 C3orf36Q3SXR2 165 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 KRTCAP3Q53RY4 240 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 SLC25A48Q6ZT89 311 aaKnown RBP15.89■□□□□ 0.13
PCF11-203ENST00000530304 DMRTC2Q8IXT2 367 aaPredicted RBP15.89■□□□□ 0.13
PCF11-203ENST00000530304 MMD2Q8IY49 270 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 OR1L6Q8NGR2 347 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 LINC00574Q9H8X3 128 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 TMEM167BQ9NRX6 74 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 POLR3KQ9Y2Y1 108 aaPredicted RBP15.89■□□□□ 0.13
PCF11-203ENST00000530304 ARL2-SNX15V9GYD0 113 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 V9GYV3 84 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 LAMA5O15230 3695 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 FRMD6-AS1P0C7T7 363 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 GNG4P50150 75 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 SELENOVP59797 346 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 MLANAQ16655 118 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 RTL8BQ17RB0 113 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 CENPWQ5EE01 88 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 ZNF788Q6ZQV5 615 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 ZNF503Q96F45 646 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 TNCP24821 2201 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 CEACAM4O75871 244 aa15.88■□□□□ 0.13
PCF11-203ENST00000530304 C22orf34Q6ZV56 151 aa15.88■□□□□ 0.13
PCF11-203ENST00000530304 TECRQ9NZ01 308 aaKnown RBP15.88■□□□□ 0.13
PCF11-203ENST00000530304 RPUSD1Q9UJJ7 312 aaKnown RBP15.88■□□□□ 0.13
PCF11-203ENST00000530304 SMG1Q96Q15 3661 aaKnown RBP15.88■□□□□ 0.13
PCF11-203ENST00000530304 CRISP2P16562 243 aa15.88■□□□□ 0.13
PCF11-203ENST00000530304 OR10J1P30954 320 aa15.88■□□□□ 0.13
PCF11-203ENST00000530304 IER3P46695 156 aa15.88■□□□□ 0.13
PCF11-203ENST00000530304 LINC00310P59036 64 aa15.88■□□□□ 0.13
PCF11-203ENST00000530304 FCN1O00602 326 aa15.87■□□□□ 0.13
PCF11-203ENST00000530304 TM4SF5O14894 197 aa15.87■□□□□ 0.13
PCF11-203ENST00000530304 C1orf194Q5T5A4 169 aa15.87■□□□□ 0.13
PCF11-203ENST00000530304 PQLC2Q6ZP29 291 aa15.87■□□□□ 0.13
PCF11-203ENST00000530304 RND1Q92730 232 aa15.87■□□□□ 0.13
PCF11-203ENST00000530304 DCAF16Q9NXF7 216 aa15.87■□□□□ 0.13
PCF11-203ENST00000530304 OR7C2O60412 319 aa15.87■□□□□ 0.13
PCF11-203ENST00000530304 CD33P20138 364 aa15.87■□□□□ 0.13
PCF11-203ENST00000530304 C2orf83Q53S99 150 aa15.87■□□□□ 0.13
PCF11-203ENST00000530304 OR8I2Q8N0Y5 310 aa15.87■□□□□ 0.13
PCF11-203ENST00000530304 SLC35E1Q96K37 410 aa15.87■□□□□ 0.13
PCF11-203ENST00000530304 SAA1P0DJI8 122 aaPredicted RBP15.86■□□□□ 0.13
PCF11-203ENST00000530304 DOLPP1Q86YN1 238 aa15.86■□□□□ 0.13
PCF11-203ENST00000530304 SNURFLB1AK76 121 aa15.86■□□□□ 0.13
PCF11-203ENST00000530304 OR10W1Q8NGF6 305 aa15.86■□□□□ 0.13
PCF11-203ENST00000530304 TMEM106BQ9NUM4 274 aa15.86■□□□□ 0.13
PCF11-203ENST00000530304 ZNF705FA8MVS1 300 aaPredicted RBP15.85■□□□□ 0.13
PCF11-203ENST00000530304 SERF1AO75920 110 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 OR10J4P0C629 311 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 ZNF705DP0CH99 300 aaPredicted RBP15.85■□□□□ 0.13
PCF11-203ENST00000530304 ZNF705BP0CI00 300 aaPredicted RBP15.85■□□□□ 0.13
PCF11-203ENST00000530304 TPPP2P59282 170 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 PAFAH1B2P68402 229 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 FAM27E3Q08E93 113 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 Q6ZWC4 215 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 OR9G1Q8NH87 305 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 TBX15Q96SF7 602 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 BET1LQ9NYM9 111 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 GGTLC3B5MD39 225 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 EREGO14944 169 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 OR5G3P0C626 314 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 RNASE2P10153 161 aaKnown RBP15.85■□□□□ 0.13
PCF11-203ENST00000530304 ESDP10768 282 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 TNFSF4P23510 183 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 C1orf185Q5T7R7 199 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 OR1L8Q8NGR8 309 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 OR5B3Q8NH48 314 aa15.85■□□□□ 0.13
PCF11-203ENST00000530304 RNASE7Q9H1E1 156 aaKnown RBP15.85■□□□□ 0.13
PCF11-203ENST00000530304 DYSFO75923 2080 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 IRF2P14316 349 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 ATP5IP56385 69 aaPredicted RBP15.84■□□□□ 0.13
PCF11-203ENST00000530304 ST6GALNAC3Q8NDV1 305 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 C19orf24Q9BVV8 132 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 PARD6AQ9NPB6 346 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 KIR2DL5BA0A0G2JN68 375 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 KIR2DL5BA0A0G2JPC4 375 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 hADV38S2A0JD32 116 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 TAS2R45P59539 299 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 TMEM30BQ3MIR4 351 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 TGIF2LXQ8IUE1 241 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 KIR2DL5AQ8N109 375 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 CBLN4Q9NTU7 201 aa15.84■□□□□ 0.13
PCF11-203ENST00000530304 F2Z2F3 143 aa15.83■□□□□ 0.13
PCF11-203ENST00000530304 CD40P25942 277 aa15.83■□□□□ 0.13
PCF11-203ENST00000530304 SUMO1P63165 101 aaKnown RBP15.83■□□□□ 0.13
PCF11-203ENST00000530304 CD69Q07108 199 aa15.83■□□□□ 0.13
PCF11-203ENST00000530304 TEX36Q5VZQ5 186 aa15.83■□□□□ 0.13
PCF11-203ENST00000530304 BAGE3Q86Y29 109 aa15.83■□□□□ 0.13
PCF11-203ENST00000530304 BAGE2Q86Y30 109 aa15.83■□□□□ 0.13
PCF11-203ENST00000530304 PNKDQ8N490 385 aa15.83■□□□□ 0.13
PCF11-203ENST00000530304 GNB1LQ9BYB4 327 aa15.83■□□□□ 0.13
PCF11-203ENST00000530304 PLCE1Q9P212 2302 aa15.83■□□□□ 0.12
PCF11-203ENST00000530304 SPINK4O60575 86 aa15.83■□□□□ 0.12
PCF11-203ENST00000530304 RANP62826 216 aaKnown RBP15.83■□□□□ 0.12
PCF11-203ENST00000530304 TIGITQ495A1 244 aa15.83■□□□□ 0.12
PCF11-203ENST00000530304 ZNF833PQ6ZTB9 187 aa15.83■□□□□ 0.12
PCF11-203ENST00000530304 FXYD3Q14802 87 aa15.82■□□□□ 0.12
PCF11-203ENST00000530304 SLC25A33Q9BSK2 321 aa15.82■□□□□ 0.12
PCF11-203ENST00000530304 MRPL20Q9BYC9 149 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms