RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 H3BTX0 84 aa7.17□□□□□ -1.26
CTNND1-221ENST00000529873 UMODP07911 640 aa7.17□□□□□ -1.26
CTNND1-221ENST00000529873 CENPWQ5EE01 88 aa7.17□□□□□ -1.26
CTNND1-221ENST00000529873 TMEM170BQ5T4T1 132 aa7.17□□□□□ -1.26
CTNND1-221ENST00000529873 TRAV8-6A0A0B4J262 113 aa7.17□□□□□ -1.26
CTNND1-221ENST00000529873 H7C1H1 209 aa7.17□□□□□ -1.26
CTNND1-221ENST00000529873 CDKN1BP46527 198 aa7.17□□□□□ -1.26
CTNND1-221ENST00000529873 LAIR2Q6ISS4 152 aa7.17□□□□□ -1.26
CTNND1-221ENST00000529873 FAM168AQ92567 244 aa7.17□□□□□ -1.26
CTNND1-221ENST00000529873 TRIP12Q14669 1992 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-221ENST00000529873 ASIPP42127 132 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 MGST2Q99735 147 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 LINC00312Q9Y6C7 94 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 TMEM238C9JI98 176 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 LHX2P50458 406 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 TFF3Q07654 80 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 UBE2V1Q13404 147 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 MRPL14Q6P1L8 145 aaKnown RBP7.16□□□□□ -1.26
CTNND1-221ENST00000529873 OR13A1Q8NGR1 328 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 CLDND2Q8NHS1 167 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 RTBDNQ9BSG5 229 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-221ENST00000529873 TMEM160Q9NX00 188 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 VENTXO95231 258 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 CNTFRP26992 372 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 GAGE2BQ13066 116 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 SRSF6Q13247 344 aaKnown RBP7.16□□□□□ -1.26
CTNND1-221ENST00000529873 GAGE2EQ4V326 116 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 C1QL2Q7Z5L3 287 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 GATAD1Q8WUU5 269 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 C18orf12Q96KH6 178 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 DPM3Q9P2X0 92 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 GAGE2DQ9UEU5 116 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 FBXL7Q9UJT9 491 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 IGFBP3P17936 291 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-221ENST00000529873 FOXA2Q9Y261 457 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-221ENST00000529873 A0A0G2JLM5 398 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 A6NNC1 897 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 CA7P43166 264 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 PAX2Q02962 417 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 C2orf68Q2NKX9 166 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 TPTE2P1Q5T6R2 138 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 FAM74A4Q5TZK3 123 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 RNASEH2CQ8TDP1 164 aaKnown RBP7.16□□□□□ -1.26
CTNND1-221ENST00000529873 ABHD17AQ96GS6 310 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 IMMP1LQ96LU5 166 aa7.16□□□□□ -1.26
CTNND1-221ENST00000529873 MRPL20Q9BYC9 149 aaKnown RBP7.16□□□□□ -1.26
CTNND1-221ENST00000529873 RRHO14718 337 aa7.15□□□□□ -1.26
CTNND1-221ENST00000529873 BIVMQ86UB2 503 aa7.15□□□□□ -1.26
CTNND1-221ENST00000529873 SDHCQ99643 169 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-221ENST00000529873 IGHV3-66A0A0C4DH42 116 aa7.15□□□□□ -1.26
CTNND1-221ENST00000529873 PAX1P15863 534 aa7.15□□□□□ -1.26
CTNND1-221ENST00000529873 IGFBP2P18065 325 aa7.15□□□□□ -1.26
CTNND1-221ENST00000529873 C9orf106Q8NAJ2 232 aa7.15□□□□□ -1.26
CTNND1-221ENST00000529873 C17orf98A8MV24 154 aa7.15□□□□□ -1.27
CTNND1-221ENST00000529873 OR11H4Q8NGC9 324 aa7.15□□□□□ -1.27
CTNND1-221ENST00000529873 FBXL15Q9H469 300 aa7.15□□□□□ -1.27
CTNND1-221ENST00000529873 PEMTQ9UBM1 199 aa7.15□□□□□ -1.27
CTNND1-221ENST00000529873 ZNF257Q9Y2Q1 563 aa7.15□□□□□ -1.27
CTNND1-221ENST00000529873 COX11Q9Y6N1 276 aa7.15□□□□□ -1.27
CTNND1-221ENST00000529873 TRBV20OR9-2A0A075B6H5 130 aa7.15□□□□□ -1.27
CTNND1-221ENST00000529873 A0A0G2JK05 382 aa7.15□□□□□ -1.27
CTNND1-221ENST00000529873 FAM216BQ8N7L0 139 aa7.15□□□□□ -1.27
CTNND1-221ENST00000529873 IL36BQ9NZH7 164 aa7.15□□□□□ -1.27
CTNND1-221ENST00000529873 SELLP14151 372 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 LEPP41159 167 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 ICAM4Q14773 271 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 MBNL2Q5VZF2 373 aaKnown RBP7.14□□□□□ -1.27
CTNND1-221ENST00000529873 TMEM105Q8N8V8 129 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 REPIN1Q9BWE0 567 aaKnown RBP7.14□□□□□ -1.27
CTNND1-221ENST00000529873 LAMTOR2Q9Y2Q5 125 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 SLC25A15Q9Y619 301 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 CEACAM4O75871 244 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 CELA3BP08861 270 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 CFHR1Q03591 330 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 ZIC4Q8N9L1 334 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 RNASE6Q93091 150 aaKnown RBP7.14□□□□□ -1.27
CTNND1-221ENST00000529873 KLK15Q9H2R5 256 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 PTPRFP10586 1907 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 IGLV3-12A0A075B6K2 115 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 IGLV3-32A0A0A0MS00 114 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 PEX7O00628 323 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 EFEMP2O95967 443 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 VDAC2P45880 294 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-221ENST00000529873 ZP1P60852 638 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 PMVKQ15126 192 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 ANKRD39Q53RE8 183 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 S100A7L2Q5SY68 101 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 ATOH7Q8N100 152 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 OR4X2Q8NGF9 303 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 VWCEQ96DN2 955 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 PDCD11Q14690 1871 aaKnown RBP7.14□□□□□ -1.27
CTNND1-221ENST00000529873 LOC102723996A0A087X1L8 192 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 C17orf100A8MU93 164 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 EFNB1P98172 346 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 TBL2Q9Y4P3 447 aaKnown RBP7.14□□□□□ -1.27
CTNND1-221ENST00000529873 PDE4DIPQ5VU43 2346 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 URB1O60287 2271 aaKnown RBP7.14□□□□□ -1.27
CTNND1-221ENST00000529873 APOMO95445 188 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 SRSF4Q08170 494 aaKnown RBP7.14□□□□□ -1.27
CTNND1-221ENST00000529873 OR5AN1Q8NGI8 311 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms