RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 PGLYRP3Q96LB9 341 aa2.59□□□□□ -2
PTPRC-213ENST00000529828 FYTTD1Q96QD9 318 aaKnown RBP2.59□□□□□ -2
PTPRC-213ENST00000529828 ABHD1Q96SE0 405 aa2.59□□□□□ -2
PTPRC-213ENST00000529828 RARRES2Q99969 163 aa2.59□□□□□ -2
PTPRC-213ENST00000529828 TCEAL7Q9BRU2 100 aa2.59□□□□□ -2
PTPRC-213ENST00000529828 TMEM59Q9BXS4 323 aa2.59□□□□□ -2
PTPRC-213ENST00000529828 AUNIPQ9H7T9 357 aa2.59□□□□□ -2
PTPRC-213ENST00000529828 SDHAF2Q9NX18 166 aa2.59□□□□□ -2
PTPRC-213ENST00000529828 APLNQ9ULZ1 77 aa2.59□□□□□ -2
PTPRC-213ENST00000529828 ORC6Q9Y5N6 252 aa2.59□□□□□ -2
PTPRC-213ENST00000529828 DMBT1Q9UGM3 2413 aaPredicted RBP2.59□□□□□ -2
PTPRC-213ENST00000529828 IGKV3-7A0A075B6H7 116 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 IRGMA1A4Y4 181 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 HELTA6NFD8 242 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 A8MWP6 167 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 E7EUB6 86 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 LGALS9O00182 355 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 OGG1O15527 345 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 ZNF207O43670 478 aaKnown RBP2.58□□□□□ -2
PTPRC-213ENST00000529828 MED6O75586 246 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 ACTL6BO94805 426 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 AREGP15514 252 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 GPR183P32249 361 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 TFPI2P48307 235 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 MFAP2P55001 183 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 UBE2G2P60604 165 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 UBE2KP61086 200 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 IFITM2Q01629 132 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 GAGE1Q13065 139 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 MED21Q13503 144 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 MED22Q15528 200 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 RTL8BQ17RB0 113 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 VMA21Q3ZAQ7 101 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 FAM106AQ4KMX7 169 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 MOB1BQ7L9L4 216 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 TMEM17Q86X19 198 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 GPHB5Q86YW7 130 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 SELENOHQ8IZQ5 122 aaKnown RBP2.58□□□□□ -2
PTPRC-213ENST00000529828 TTC9CQ8N5M4 171 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 ZNF645Q8N7E2 425 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 OR6M1Q8NGM8 313 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 OR11H2Q8NH07 326 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 CENPNQ96H22 339 aaPredicted RBP2.58□□□□□ -2
PTPRC-213ENST00000529828 DERL3Q96Q80 235 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 SPIN2AQ99865 258 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 PRRT1Q99946 306 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 SPIN2BQ9BPZ2 258 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 C2orf88Q9BSF0 95 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 ZNF2Q9BSG1 426 aaPredicted RBP2.58□□□□□ -2
PTPRC-213ENST00000529828 MAP6D1Q9H9H5 199 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 PLEKHJ1Q9NW61 149 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 BABAM2Q9NXR7 383 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 MGAT4AQ9UM21 535 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 IGLV2-18A0A075B6J9 118 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 KIR2DL5BA0A0G2JN68 375 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 KIR2DL5BA0A0G2JPC4 375 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 A0A1B0GW64 132 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 A0A1W2PPV4 95 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 LINC00473A8K010 186 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 TEX22C9J3V5 150 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 CCSO14618 274 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 CA1P00915 261 aaPredicted RBP2.58□□□□□ -2
PTPRC-213ENST00000529828 GPX4P36969 197 aaPredicted RBP2.58□□□□□ -2
PTPRC-213ENST00000529828 P2RY14Q15391 338 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 TMPRSS11AQ6ZMR5 421 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 Q6ZTC4 211 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 ZNF767PQ75MW2 155 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 KCTD9Q7L273 389 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 SPAG16Q8N0X2 631 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 KIR2DL5AQ8N109 375 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 CBR4Q8N4T8 237 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 TEX45Q8NA69 505 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 KIR2DL5BQ8NHK3 375 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 RHOXF1Q8NHV9 184 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 PHYHIPQ92561 330 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 PTX4Q96A99 478 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 EEF1AKMT3Q96AZ1 226 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 ARHGAP5-AS1Q96IT6 56 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 Q96MT0 163 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 FANCD2OSQ96PS1 177 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 SPAG8Q99932 426 aaPredicted RBP2.58□□□□□ -2
PTPRC-213ENST00000529828 DCUN1D5Q9BTE7 237 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 SCRT1Q9BWW7 348 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 Q9N2K0 584 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 FGF20Q9NP95 211 aaPredicted RBP2.58□□□□□ -2
PTPRC-213ENST00000529828 KCNK7Q9Y2U2 307 aa2.58□□□□□ -2
PTPRC-213ENST00000529828 RBMX2Q9Y388 322 aaKnown RBP2.58□□□□□ -2
PTPRC-213ENST00000529828 RPL36Q9Y3U8 105 aaKnown RBP2.58□□□□□ -2
PTPRC-213ENST00000529828 RBM7Q9Y580 266 aaKnown RBP2.58□□□□□ -2
PTPRC-213ENST00000529828 HMCN2Q8NDA2 5059 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 IGHV4-4A0A075B6R2 117 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 IGHV3-49A0A0A0MS15 119 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 IGHV3-21A0A0B4J1V1 117 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 TRAV25A0A0B4J276 109 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 MPTX1A8MV57 137 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 FCGR3BO75015 233 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 IFNA10P01566 189 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 IL6RP08887 468 aaPredicted RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 MYL12AP19105 171 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 ELLP55199 621 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms