RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	ZNF841	Q6ZN19	808 aa		11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	GBGT1	Q8N5D6	347 aa		11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	CELSR2	Q9HCU4	2923 aa		11.9	□□□□□ -0.51
NR1H3-231	ENST00000529540	C17orf112	F2Z3M2	114 aa		11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	RPL15	P61313	204 aa	Known RBP	11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	CR1L	Q2VPA4	569 aa		11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	TMEM144	Q7Z5S9	345 aa		11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	OR10P1	Q8NGE3	313 aa		11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	H1FX	Q92522	213 aa	Known RBP	11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	CORO2A	Q92828	525 aa		11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	NEU1	Q99519	415 aa		11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	DCTN5	Q9BTE1	182 aa		11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	NPCDR1	Q9BY65	106 aa		11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	GAL3ST2	Q9H3Q3	398 aa		11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	FUT9	Q9Y231	359 aa		11.89	□□□□□ -0.51
NR1H3-231	ENST00000529540	SPG11	Q96JI7	2443 aa		11.88	□□□□□ -0.51
NR1H3-231	ENST00000529540	TRAV39	A0A0B4J263	110 aa		11.88	□□□□□ -0.51
NR1H3-231	ENST00000529540	PDE6D	O43924	150 aa		11.88	□□□□□ -0.51
NR1H3-231	ENST00000529540	CNN1	P51911	297 aa	Known RBP	11.88	□□□□□ -0.51
NR1H3-231	ENST00000529540	NUTF2	P61970	127 aa	Known RBP	11.88	□□□□□ -0.51
NR1H3-231	ENST00000529540	CATR1	Q13166	79 aa		11.88	□□□□□ -0.51
NR1H3-231	ENST00000529540	HNF4G	Q14541	408 aa		11.88	□□□□□ -0.51
NR1H3-231	ENST00000529540	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.88	□□□□□ -0.51
NR1H3-231	ENST00000529540	C8orf46	Q8TAG6	207 aa		11.88	□□□□□ -0.51
NR1H3-231	ENST00000529540	GATAD1	Q8WUU5	269 aa		11.88	□□□□□ -0.51
NR1H3-231	ENST00000529540	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540		F6UZH7	168 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	SPINT2	O43291	252 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	PAGE4	O60829	102 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	LIPF	P07098	398 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	LMO4	P61968	165 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	LOXL1	Q08397	574 aa	Predicted RBP	11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	ZNF709	Q8N972	641 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	DTD1	Q8TEA8	209 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	TMEM37	Q8WXS4	190 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	UNC79	Q9P2D8	2635 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	LOC105371242	A0A075B767	164 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	IGHV4-61	A0A0C4DH41	118 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	KIR2DL5B	A0A0G2JN68	375 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	KIR2DL5B	A0A0G2JPC4	375 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	ENSA	O43768	121 aa	Known RBP	11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	SNRPC	P09234	159 aa	Known RBP	11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	NPPC	P23582	126 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	IL3RA	P26951	378 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	CDC34	P49427	236 aa	Predicted RBP	11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	ZNF124	Q15973	351 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	KIR2DL5A	Q8N109	375 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	GALM	Q96C23	342 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	C5orf30	Q96GV9	206 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	ZNF714	Q96N38	554 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	TXNDC17	Q9BRA2	123 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	KCNIP2	Q9NS61	270 aa		11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.87	□□□□□ -0.51
NR1H3-231	ENST00000529540	NAV2	Q8IVL1	2488 aa		11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	C11orf94	C9JXX5	98 aa		11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	HMGB3	O15347	200 aa	Known RBP	11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	RBP4	P02753	201 aa		11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	RPL30	P62888	115 aa	Known RBP	11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	FOXL1	Q12952	345 aa		11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	MRPL52	Q86TS9	123 aa	Known RBP	11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	LINC01551	Q86U37	167 aa		11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	MRPL41	Q8IXM3	137 aa	Known RBP	11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	PRR18	Q8N4B5	295 aa		11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	TPRX1	Q8N7U7	411 aa		11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	MRGPRD	Q8TDS7	321 aa		11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540		Q96MF0	132 aa		11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	WDR83OS	Q9Y284	106 aa		11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	PXMP4	Q9Y6I8	212 aa		11.86	□□□□□ -0.51
NR1H3-231	ENST00000529540	ANKRD17	O75179	2603 aa	Known RBP	11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	CENPE	Q02224	2701 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	APC	P25054	2843 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	PPIAL4C	A0A0B4J2A2	164 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	TCAP	O15273	167 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	RAMP3	O60896	148 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	PPIAL4G	P0DN37	164 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	G6PC	P35575	357 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	C1orf194	Q5T5A4	169 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	TGIF2LX	Q8IUE1	241 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	OR13A1	Q8NGR1	328 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	FAM216A	Q8WUB2	273 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	LINC00574	Q9H8X3	128 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540	ABCA12	Q86UK0	2595 aa		11.85	□□□□□ -0.51
NR1H3-231	ENST00000529540		B4DSR2	109 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	EREG	O14944	169 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	S1PR2	O95136	353 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	ERVFC1-1	P60608	527 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	GNB1	P62873	340 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	HTD2	P86397	168 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	USF2	Q15853	346 aa	Predicted RBP	11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	AARD	Q4LEZ3	155 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	FAM78B	Q5VT40	261 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	TMEM200B	Q69YZ2	307 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	BTNL3	Q6UXE8	466 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	KIR3DL3	Q8N743	410 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540		Q8N7P7	452 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	LY6G5B	Q8NDX9	201 aa		11.84	□□□□□ -0.51
NR1H3-231	ENST00000529540	OR2D2	Q9H210	308 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms